Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4013 Punica granatum HOM05D008287 ORTHO05D010110 7.4e-37 157.1 108 100.0
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 7.7e-10 67.4 105 37.1
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 1.0e-09 67.0 105 37.1
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 2.2e-09 65.9 105 36.2
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 2.2e-09 65.9 107 37.4
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 1.1e-08 63.5 107 54.2
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 2.5e-08 62.4 105 34.3
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 4.2e-08 61.6 103 35.9
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 7.2e-08 60.8 105 33.3
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 2.7e-07 58.9 92 37.0
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 3.6e-07 58.5 105 34.3
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.6e-07 58.5 32 78.1
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.6e-07 58.5 32 78.1
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 4.7e-07 58.2 102 34.3
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 4.7e-07 58.2 107 32.7
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 6.1e-07 57.8 105 30.5
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 6.1e-07 57.8 32 75.0
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 1.0e-06 57.0 105 32.4
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.0e-06 57.0 107 30.8
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 1.0e-06 57.0 105 39.0
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 1.0e-06 57.0 32 75.0
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 1.0e-06 57.0 32 75.0
Cfa021511 Carpinus fangiana HOM05D008287 ORTHO05D010110 2.3e-06 55.8 97 36.1
Eucgr.G02829 Eucalyptus grandis HOM05D055458 ORTHO05D010110 2.3e-06 55.8 104 39.4
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 2.3e-06 55.8 92 35.9
Lsat_1_v5_gn_2_114761 Lactuca sativa HOM05D008287 ORTHO05D010110 3.0e-06 55.5 99 54.5
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 4.0e-06 55.1 32 71.9
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 5.2e-06 54.7 98 48.0
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 5.2e-06 54.7 98 35.7
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 8.8e-06 53.9 35 65.7
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 8.8e-06 53.9 35 65.7
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 8.8e-06 53.9 35 65.7
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 8.8e-06 53.9 35 65.7


User provided reference genes

Program Settings