Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3798 Punica granatum HOM05D000256 ORTHO05D000119 1.6e-79 299.3 140 100.0
Sed0017733 Sechium edule HOM05D000256 ORTHO05D000119 1.8e-14 83.2 110 36.4
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.5e-13 80.1 109 36.7
ClCG06G007560 Citrullus lanatus HOM05D000256 ORTHO05D000119 2.5e-13 79.3 131 32.8
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.8e-12 75.9 109 35.8
Ciclev10007065m.g Citrus clementina HOM05D000256 ORTHO05D000119 6.3e-12 74.7 135 33.3
CsaV3_2G012100 Cucumis sativus L. HOM05D000256 ORTHO05D000119 6.3e-12 74.7 131 30.5
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 1.3e-09 67.0 106 33.0
BcaC09g48660 Brassica carinata HOM05D000256 ORTHO05D000119 3.8e-09 65.5 138 29.7
BolC1t04690H Brassica oleracea HOM05D000256 ORTHO05D000119 3.8e-09 65.5 138 29.7
MELO3C027025.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.8e-09 65.5 112 36.6
Prupe.1G057200 Prunus persica HOM05D000256 ORTHO05D000119 5.0e-09 65.1 94 29.8
MELO3C029931.2 Cucumis melo HOM05D000256 ORTHO05D000119 6.5e-09 64.7 112 34.8
PGR042G0022 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G0549 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G0996 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G1053 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G1377 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G1542 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G1949 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G2280 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G2642 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G3183 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G3343 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
PGR042G3721 Punica granatum HOM05D000256 ORTHO05D000119 8.5e-09 64.3 107 32.7
MELO3C027517.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.1e-08 63.9 115 35.7
MELO3C027521.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.1e-08 63.9 115 35.7
Duzib268G1414 Durio zibethinus HOM05D000256 ORTHO05D000119 1.1e-08 63.9 95 33.7
Sed0016424 Sechium edule HOM05D000256 ORTHO05D000119 1.9e-08 63.2 145 30.3
Manes.03G154200 Manihot esculenta HOM05D000256 ORTHO05D000119 2.5e-08 62.8 108 33.3
Phvul.011G169310 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.5e-08 62.8 140 31.4
PGR042G3114 Punica granatum HOM05D000256 ORTHO05D005461 3.2e-08 62.4 97 33.0
PGR042G2906 Punica granatum HOM05D000256 ORTHO05D000119 7.2e-08 61.2 129 29.5
Phvul.011G171900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 9.3e-08 60.8 117 33.3
Lalb_Chr06g0176301 Lupinus albus HOM05D000256 ORTHO05D000119 1.2e-07 60.5 93 36.6
Manes.03G153250 Manihot esculenta HOM05D000256 ORTHO05D000119 1.2e-07 60.5 108 31.5
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 2.1e-07 59.7 99 32.3
EL10Ac2g04507 Beta vulgaris HOM05D000256 ORTHO05D000119 2.7e-07 59.3 135 29.6
MD04G1130600 Malus domestica HOM05D000256 ORTHO05D000119 2.7e-07 59.3 133 31.6
Lalb_Chr17g0336911 Lupinus albus HOM05D000256 ORTHO05D000119 3.6e-07 58.9 93 32.3
Phvul.008G064200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.6e-07 58.9 99 32.3
THA.LOC104801552 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 4.6e-07 58.5 109 34.9
GSVIVG01014884001 Vitis vinifera HOM05D000256 ORTHO05D000119 4.6e-07 58.5 135 28.1
Medtr1g060940 Medicago truncatula HOM05D000256 ORTHO05D000119 6.1e-07 58.2 118 33.9
RcHm_v2.0_Chr7g0215481 Rosa chinensis HOM05D000256 ORTHO05D000119 6.1e-07 58.2 96 36.5
Atru.chr8.2530 Acer truncatum HOM05D000256 ORTHO05D000119 7.9e-07 57.8 138 29.7
TPR.G8259 Trifolium pratense HOM05D000256 ORTHO05D000119 7.9e-07 57.8 99 31.3
TPR.G23404 Trifolium pratense HOM05D000256 ORTHO05D000119 1.0e-06 57.4 136 27.2
Atru.chr8.2527 Acer truncatum HOM05D000256 ORTHO05D000119 1.3e-06 57.0 138 29.7
Prupe.1G062500 Prunus persica HOM05D000256 ORTHO05D000119 1.3e-06 57.0 109 30.3
FvH4_1g24901 Fragaria vesca HOM05D000256 ORTHO05D000119 1.8e-06 56.6 102 34.3
TPR.G23411 Trifolium pratense HOM05D000256 ORTHO05D000119 1.8e-06 56.6 133 27.8
CANSAT78G0693 Cannabis sativa HOM05D000256 ORTHO05D000119 3.0e-06 55.8 112 31.2
Lalb_Chr17g0336901 Lupinus albus HOM05D000256 ORTHO05D000119 3.0e-06 55.8 93 31.2
CANSAT35G0230 Cannabis sativa HOM05D000256 ORTHO05D000119 3.9e-06 55.5 79 35.4
Medtr7g055917 Medicago truncatula HOM05D000256 ORTHO05D000119 3.9e-06 55.5 131 26.0
Prupe.1G059200 Prunus persica HOM05D000256 ORTHO05D000119 3.9e-06 55.5 132 29.5
TPR.G19335 Trifolium pratense HOM05D000256 ORTHO05D000119 6.7e-06 54.7 118 30.5
THA.LOC104801052 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 8.7e-06 54.3 106 34.9


User provided reference genes

Program Settings