Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 6.3e-140 500.7 250 100.0
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.8e-102 376.3 238 75.6
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 4.0e-102 375.2 232 78.9
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 5.8e-101 371.3 229 79.5
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 3.7e-100 368.6 247 72.1
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 6.4e-100 367.9 236 77.1
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 8.3e-100 367.5 247 71.7
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 1.4e-99 366.7 239 75.3
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 3.2e-99 365.5 243 74.1
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 1.6e-98 363.2 247 73.7
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 2.1e-98 362.8 241 75.1
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 2.1e-98 362.8 247 71.7
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 7.8e-98 360.9 238 73.9
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 5.1e-97 358.2 248 72.2
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 8.6e-97 357.5 239 71.5
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 8.6e-97 357.5 248 70.2
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.5e-96 356.7 238 73.9
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.9e-96 356.3 246 71.5
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 7.3e-96 354.4 229 76.0
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 9.5e-96 354.0 246 71.1
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.2e-95 353.6 229 75.1
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.2e-95 353.6 246 71.1
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 3.6e-95 352.1 237 72.2
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 4.7e-95 351.7 257 68.5
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 8.1e-95 350.9 231 75.8
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.1e-94 350.5 228 75.0
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.8e-94 349.7 247 70.0
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.8e-94 349.7 267 66.3
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.8e-94 349.7 242 70.2
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.3e-94 349.4 229 74.2
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 2.3e-94 349.4 238 70.6
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 6.8e-94 347.8 232 72.4
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 8.9e-94 347.4 247 69.6
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 8.9e-94 347.4 247 68.8
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 2.2e-92 342.8 247 68.0
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 2.9e-92 342.4 247 66.8
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.1e-91 340.5 248 68.1
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 2.4e-91 339.3 247 67.2
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.2e-91 339.0 245 67.8
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 4.1e-91 338.6 254 65.7
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 7.1e-91 337.8 247 69.2
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 1.2e-90 337.0 244 66.8
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 1.6e-90 336.7 246 67.9
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 1.6e-90 336.7 246 67.9
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 2.1e-90 336.3 245 67.3
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 2.1e-90 336.3 249 69.5
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.7e-90 335.9 247 68.4
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 4.6e-90 335.1 242 65.7
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 6.0e-90 334.7 245 68.2
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 6.0e-90 334.7 242 65.7
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 6.0e-90 334.7 247 68.0
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.0e-89 334.0 245 66.9
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.7e-89 333.2 245 66.9
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.7e-89 333.2 245 66.9
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 2.3e-89 332.8 243 67.9
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 3.9e-89 332.0 246 65.4
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 5.1e-89 331.6 247 67.6
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 6.6e-89 331.3 245 66.1
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 8.6e-89 330.9 273 63.0
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 1.9e-88 329.7 233 71.2
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.9e-88 329.7 266 63.2
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.9e-88 329.7 244 65.2
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 7.3e-88 327.8 251 62.9
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 9.6e-88 327.4 239 70.3
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 2.8e-87 325.9 246 65.9
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.8e-87 325.9 273 62.3
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 2.8e-87 325.9 243 68.3
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 3.6e-87 325.5 272 62.5
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 4.7e-87 325.1 247 66.8
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.4e-86 323.6 272 62.5
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 3.1e-86 322.4 245 67.8
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 8.9e-86 320.9 244 64.3
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.5e-85 320.1 234 67.9
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 4.4e-85 318.5 242 66.1
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 5.8e-85 318.2 234 67.5
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 9.9e-85 317.4 260 59.6
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 9.9e-85 317.4 246 65.0
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 1.3e-84 317.0 221 70.1
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.7e-84 316.6 244 63.5
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 1.7e-84 316.6 237 66.7
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 2.2e-84 316.2 246 64.6
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 4.9e-84 315.1 242 63.6
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 4.9e-84 315.1 244 63.1
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 6.4e-84 314.7 231 67.1
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.9e-83 313.2 235 66.0
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.6e-82 310.1 269 62.8
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 2.3e-81 306.2 235 63.4
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 3.0e-81 305.8 250 59.2
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 3.0e-81 305.8 242 66.9
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 8.7e-81 304.3 255 61.6
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 2.5e-80 302.8 284 54.9
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 5.8e-77 291.6 271 57.2
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.3e-76 290.4 252 61.1
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 3.5e-74 282.3 245 59.6
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 3.6e-71 272.3 226 61.1
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 7.6e-69 264.6 183 71.0
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 7.1e-67 258.1 237 58.6
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 1.8e-65 253.4 182 70.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 5.7e-56 221.9 223 55.2
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.1e-54 217.6 260 46.5
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 5.9e-53 211.8 257 50.2
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 5.9e-53 211.8 270 43.7
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.2e-50 204.1 250 51.2
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.6e-50 203.8 119 79.0
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 5.9e-45 185.3 190 50.0
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 5.9e-45 185.3 248 43.1
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 5.5e-43 178.7 121 66.1
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 2.7e-34 149.8 120 58.3
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 4.7e-34 149.1 124 62.9
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.5e-29 132.9 151 53.6
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.8e-22 110.5 111 55.9
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 2.2e-20 103.6 139 38.1
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 2.7e-18 96.7 111 46.8
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 8.0e-10 68.6 55 52.7
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.8e-09 67.4 38 84.2
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 5.2e-09 65.9 137 37.2
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 8.8e-09 65.1 53 60.4


User provided reference genes

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