Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 2.0e-115 419.1 206 100.0
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 9.3e-81 303.9 179 82.7
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 2.7e-19 99.8 138 42.0
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.7e-18 97.1 138 42.0
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 1.1e-17 94.4 138 41.3
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.5e-14 84.0 160 35.6
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 5.8e-14 82.0 125 32.8
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.5e-14 81.6 125 33.6
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-13 79.3 106 35.8
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.4e-13 78.6 112 33.0
DCAR_027027 Daucus carota HOM05D014660 ORTHO05D016977 1.4e-12 77.4 127 33.9
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.4e-12 76.6 134 32.8
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.1e-12 75.9 149 29.5
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.1e-12 75.9 149 29.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-11 73.6 94 39.4
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.5e-11 72.8 124 38.7
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.0e-11 72.0 121 38.0
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.0e-11 72.0 124 37.9
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 6.0e-11 72.0 128 33.6
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.0e-10 71.2 152 30.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.3e-10 70.9 121 33.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.3e-10 70.9 99 40.4
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.3e-10 70.9 141 29.8
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-10 70.5 122 32.8
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-10 70.1 123 31.7
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-10 70.1 107 33.6
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.0e-10 69.7 122 32.8
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 5.0e-10 68.9 121 33.1
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 6.6e-10 68.6 144 32.6
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 6.6e-10 68.6 116 31.9
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-09 67.8 122 32.0
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.5e-09 67.4 142 35.2
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.5e-09 67.4 129 36.4
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.5e-09 66.6 121 29.8
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.3e-09 66.2 116 32.8
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-09 66.2 89 40.4
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.3e-09 65.9 128 31.2
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.3e-09 65.9 89 33.7
Rhsim01G0028600 Rhododendron simsii HOM05D018834 ORTHO05D011812 4.3e-09 65.9 144 32.6
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 5.6e-09 65.5 118 33.1
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.5e-09 64.7 79 36.7
DCAR_027025 Daucus carota HOM05D014660 ORTHO05D016977 9.5e-09 64.7 121 28.1
Rhsim01G0028900 Rhododendron simsii HOM05D018834 ORTHO05D011812 9.5e-09 64.7 144 31.9
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.2e-08 64.3 108 37.0
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.6e-08 63.9 137 34.3
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.1e-08 63.5 101 37.6
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 2.8e-08 63.2 101 37.6
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 2.8e-08 63.2 109 35.8
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 2.8e-08 63.2 109 35.8
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.7e-08 62.4 102 36.3
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 4.7e-08 62.4 147 29.9
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 6.2e-08 62.0 109 35.8
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 6.2e-08 62.0 162 29.0
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 6.2e-08 62.0 162 29.0
CiPaw.14G122000 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.1e-07 61.2 125 32.0
Rhsim01G0035000 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.1e-07 61.2 123 33.3
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-07 60.5 121 28.9
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-07 60.5 121 28.9
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.8e-07 60.5 127 33.9
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 3.1e-07 59.7 125 34.4
CiPaw.13G180200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.1e-07 59.7 135 32.6
Thecc.01G408800 Theobroma cacao HOM05D008623 ORTHO05D007789 5.2e-07 58.9 101 29.7
A04p29060 Brassica napus HOM05D002666 ORTHO05D004769 6.8e-07 58.5 126 33.3
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 6.8e-07 58.5 112 32.1
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.8e-07 58.5 98 33.7
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 6.8e-07 58.5 106 33.0
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.9e-07 58.2 138 28.3
Thhalv10025678m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 1.2e-06 57.8 141 27.7
Rhsim01G0028500 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.2e-06 57.8 123 32.5
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.5e-06 57.4 92 37.0
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.0e-06 57.0 124 29.0
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 2.0e-06 57.0 88 34.1
CiPaw.10G039300 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.6e-06 56.6 115 32.2
BolC4t28134H Brassica oleracea HOM05D002666 ORTHO05D004769 4.4e-06 55.8 126 31.0
Psat5g102520 Pisum sativum HOM05D009148 ORTHO05D011895 4.4e-06 55.8 81 33.3
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 4.4e-06 55.8 94 34.0
vmacro05103 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.4e-06 55.8 133 28.6
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.8e-06 55.5 134 32.8
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 5.8e-06 55.5 104 32.7
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.8e-06 55.5 131 31.3
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 7.5e-06 55.1 110 29.1
Carub.0005s1048 Capsella rubella HOM05D002666 ORTHO05D014834 9.9e-06 54.7 120 28.3
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.9e-06 54.7 147 25.2


User provided reference genes

Program Settings