Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 5.5e-87 324.3 170 100.0
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.2e-35 152.9 133 65.4
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 6.4e-35 151.4 133 64.7
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.4e-34 149.4 152 57.9
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 1.0e-32 144.1 178 53.4
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.3e-32 143.7 186 53.8
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.9e-32 142.1 87 83.9
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 1.5e-31 140.2 126 63.5
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.9e-31 139.8 183 51.9
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.9e-31 139.8 183 49.7
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 4.3e-31 138.7 144 59.7
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 4.3e-31 138.7 124 66.9
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 5.6e-31 138.3 167 53.9
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 5.6e-31 138.3 180 54.4
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 7.3e-31 137.9 151 57.6
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 9.5e-31 137.5 168 53.6
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 9.5e-31 137.5 174 52.3
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 1.2e-30 137.1 126 62.7
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.2e-30 137.1 127 62.2
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 1.6e-30 136.7 126 62.7
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.6e-30 136.7 183 49.2
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.1e-30 136.3 121 68.6
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 2.8e-30 136.0 117 63.2
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 4.7e-30 135.2 126 61.9
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 4.7e-30 135.2 126 61.9
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 4.7e-30 135.2 118 62.7
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 8.1e-30 134.4 122 64.8
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 1.4e-29 133.7 188 48.4
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 1.8e-29 133.3 126 61.1
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.8e-29 133.3 182 49.5
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 2.3e-29 132.9 188 49.5
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.3e-29 132.9 151 57.0
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 3.1e-29 132.5 182 48.9
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 4.0e-29 132.1 167 52.1
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 4.0e-29 132.1 126 61.1
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 5.2e-29 131.7 135 61.5
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 5.2e-29 131.7 95 73.7
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 1.2e-28 130.6 178 48.3
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.5e-28 130.2 118 64.4
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.5e-28 130.2 118 64.4
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 2.6e-28 129.4 170 48.2
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 2.6e-28 129.4 122 64.8
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 3.4e-28 129.0 181 48.6
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 3.4e-28 129.0 125 60.8
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 4.4e-28 128.6 125 62.4
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 4.4e-28 128.6 132 59.1
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 7.6e-28 127.9 182 47.3
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 7.6e-28 127.9 97 70.1
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 7.6e-28 127.9 170 50.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 9.9e-28 127.5 160 51.9
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 9.9e-28 127.5 125 61.6
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 2.2e-27 126.3 146 54.1
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 3.8e-27 125.6 182 48.9
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 3.8e-27 125.6 118 61.9
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.9e-27 125.2 174 48.9
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 4.9e-27 125.2 119 63.0
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 4.9e-27 125.2 119 63.0
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 4.9e-27 125.2 119 63.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 6.4e-27 124.8 90 72.2
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 6.4e-27 124.8 88 76.1
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 1.1e-26 124.0 91 73.6
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.9e-26 123.2 152 52.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 1.9e-26 123.2 127 59.8
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.4e-26 122.9 145 52.4
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 2.4e-26 122.9 145 51.7
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 3.2e-26 122.5 117 61.5
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 4.1e-26 122.1 169 46.2
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 5.4e-26 121.7 87 72.4
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 5.4e-26 121.7 166 48.8
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 7.1e-26 121.3 181 47.0
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 2.1e-25 119.8 177 48.0
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.6e-25 118.6 176 46.6
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 7.8e-25 117.9 118 58.5
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 7.8e-25 117.9 175 46.9
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 7.8e-25 117.9 81 75.3
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.0e-24 117.5 130 53.8
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.0e-24 117.5 119 58.0
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.3e-24 116.3 87 72.4
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 3.0e-24 115.9 90 67.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 3.0e-24 115.9 167 45.5
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 5.1e-24 115.2 136 53.7
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 1.1e-23 114.0 129 55.0
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 3.3e-23 112.5 75 78.7
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 9.6e-23 110.9 178 46.1
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 1.2e-22 110.5 161 47.8
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.1e-22 109.8 132 51.5
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 6.2e-22 108.2 151 47.7
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.1e-21 107.5 93 61.3
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.4e-21 107.1 119 54.6
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 3.1e-21 105.9 156 45.5
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.2e-20 104.0 73 74.0
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.5e-20 103.6 76 72.4
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 2.0e-20 103.2 147 47.6
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 4.4e-20 102.1 68 73.5
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 2.2e-19 99.8 135 49.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 8.4e-19 97.8 61 78.7
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 5.4e-18 95.1 84 57.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.1e-17 93.2 60 75.0
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 6.9e-13 78.2 77 58.4
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 2.0e-12 76.6 77 53.2
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 4.9e-11 72.0 65 61.5
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 8.4e-11 71.2 61 60.7
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 1.6e-09 67.0 117 42.7
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 3.9e-08 62.4 133 38.3
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 8.7e-08 61.2 136 36.0
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 4.3e-07 58.9 112 38.4


User provided reference genes

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