Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3653 Punica granatum HOM05D000005 ORTHO05D007072 6.3e-105 384.8 313 100.0
PGR142G2658 Punica granatum HOM05D000005 ORTHO05D007072 1.3e-54 217.6 199 63.8
PGR142G0655 Punica granatum HOM05D000005 ORTHO05D007072 2.1e-39 167.2 157 70.7
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-35 152.1 277 45.5
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-33 147.5 264 40.9
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-32 143.7 163 68.7
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 1.5e-26 124.4 267 37.8
PGR142G0579 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-25 120.2 128 54.7
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 8.4e-25 118.6 206 40.8
PGR142G4263 Punica granatum HOM05D000005 ORTHO05D000012 5.7e-21 105.9 128 52.3
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-20 104.0 256 35.5
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 3.7e-20 103.2 200 38.0
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-18 97.4 123 49.6
PGR142G4482 Punica granatum HOM05D000005 ORTHO05D007073 5.9e-18 95.9 131 46.6
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 2.9e-17 93.6 129 48.8
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-16 91.7 127 45.7
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-14 84.3 109 48.6
PGR142G2801 Punica granatum HOM05D000005 ORTHO05D007072 2.3e-14 84.0 275 33.1
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-14 83.2 166 39.8
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 5.1e-14 82.8 111 46.8
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-13 81.6 111 46.8
PGR142G2762 Punica granatum HOM05D000005 ORTHO05D007072 7.4e-13 79.0 275 30.5
Nn8g41080 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.2e-12 77.4 217 29.5
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 8.2e-12 75.5 111 44.1
PGR142G3630 Punica granatum HOM05D017779 ORTHO05D007072 6.9e-11 72.4 80 53.8
Medtr6g072510 Medicago truncatula HOM05D000005 ORTHO05D000012 2.2e-09 67.4 222 30.6
PGR142G3211 Punica granatum HOM05D000005 ORTHO05D000012 3.8e-09 66.6 227 31.7
Eucgr.C02088 Eucalyptus grandis HOM05D012617 ORTHO05D007072 1.1e-08 65.1 184 31.5
Eucgr.E03126 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-08 65.1 208 33.2
PGR142G2372 Punica granatum HOM05D000005 ORTHO05D000012 1.9e-08 64.3 128 40.6
PGR142G2344 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-08 63.9 214 31.3
Eucgr.C02040 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.2e-07 61.6 224 31.2
Nn1g09534 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.2e-07 61.6 212 28.3
Nn8g40999 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.6e-07 61.2 234 29.9
Eucgr.C02087 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.7e-07 60.5 208 33.7
Eucgr.E01810 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-07 60.5 151 33.8
Eucgr.E01836 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-07 60.5 135 35.6
Eucgr.E01852 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-07 60.5 135 35.6
PGR004G1357 Punica granatum HOM05D018689 ORTHO05D007072 2.7e-07 60.5 237 31.6
PGR142G2220 Punica granatum HOM05D000005 ORTHO05D000012 3.6e-07 60.1 148 36.5
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 6.1e-07 59.3 198 32.3
Eucgr.E01860 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.9e-07 58.9 154 33.1
PGR142G4450 Punica granatum HOM05D000005 ORTHO05D336650 7.9e-07 58.9 195 30.8
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-06 58.5 152 37.5
Eucgr.J01330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.4e-06 58.2 135 37.0
Nn8g40974 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.4e-06 58.2 200 31.5
Eucgr.H03827 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-06 57.8 150 34.7
Eucgr.J01296 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-06 57.8 147 36.1
Phvul.003G072500 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.8e-06 57.8 79 40.5
arahy.Tifrunner.gnm1.ann1.677PQ2 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.0e-06 57.0 178 31.5
Eucgr.C02865 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.9e-06 56.6 212 28.8
Eucgr.C02044 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.1e-06 56.2 166 30.7
PGR102G0526 Punica granatum HOM05D000005 ORTHO05D000012 5.1e-06 56.2 151 37.1
Nn5g27647 Nelumbo nucifera HOM05D000005 ORTHO05D000012 6.7e-06 55.8 128 35.2


User provided reference genes

Program Settings