Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 2.2e-196 688.7 340 100.0
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 1.2e-141 506.9 334 73.4
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 4.3e-139 498.4 316 75.0
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 7.3e-139 497.7 314 76.4
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.2e-138 496.9 333 72.4
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 8.0e-138 494.2 331 72.2
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.8e-137 493.0 325 72.3
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.8e-137 493.0 304 77.3
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.3e-137 492.7 320 74.4
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 5.2e-137 491.5 300 78.3
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 5.2e-137 491.5 340 71.5
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 6.8e-137 491.1 335 71.0
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 8.9e-137 490.7 319 73.7
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.2e-136 490.3 314 74.2
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.2e-136 490.3 329 72.0
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.6e-136 489.2 336 72.0
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 7.5e-136 487.6 315 74.0
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.3e-135 486.9 317 73.8
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 1.3e-135 486.9 315 74.0
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.2e-135 486.1 344 69.8
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 6.4e-135 484.6 319 73.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 5.4e-134 481.5 326 71.8
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 4.6e-133 478.4 340 71.2
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 4.6e-133 478.4 310 73.5
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 4.6e-133 478.4 320 71.6
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 7.8e-133 477.6 313 73.2
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.3e-132 476.9 306 75.5
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 5.0e-132 474.9 329 69.9
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 6.6e-132 474.6 316 71.8
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.5e-131 473.4 331 69.8
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 7.3e-131 471.1 331 69.2
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 7.3e-131 471.1 310 72.9
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 9.5e-131 470.7 311 71.7
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 9.5e-131 470.7 311 71.7
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.8e-130 469.2 319 69.0
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 4.7e-130 468.4 341 70.4
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 4.7e-130 468.4 310 72.3
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.4e-129 466.8 329 70.2
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.8e-129 466.5 343 67.3
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.3e-129 466.1 328 70.7
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-129 465.7 328 69.2
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 4.0e-129 465.3 317 70.7
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.2e-128 463.8 329 70.2
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 2.0e-128 463.0 325 68.3
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.6e-128 462.6 312 73.1
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.4e-128 462.2 331 68.3
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.7e-127 459.9 332 67.8
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.7e-127 459.9 309 73.1
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 1.7e-127 459.9 308 71.8
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 3.7e-127 458.8 339 67.0
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 6.4e-127 458.0 313 69.6
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 8.3e-127 457.6 317 68.5
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.3e-127 457.6 313 71.2
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.3e-127 457.6 313 71.2
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 8.3e-127 457.6 313 70.0
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 3.2e-126 455.7 339 68.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.5e-125 452.2 335 67.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 7.8e-125 451.1 319 69.3
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 2.3e-124 449.5 307 71.0
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 3.0e-124 449.1 319 68.3
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 2.5e-123 446.0 336 67.0
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 4.3e-123 445.3 300 69.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.2e-122 443.7 336 66.4
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.1e-121 440.7 336 65.2
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.1e-121 440.7 310 66.1
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.4e-121 440.3 318 67.3
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 4.0e-121 438.7 334 67.4
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.2e-120 437.2 318 66.7
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.5e-120 436.8 333 67.6
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.7e-119 432.2 303 67.3
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 4.9e-119 431.8 350 63.7
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.9e-118 429.9 343 64.4
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 5.4e-118 428.3 312 65.4
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 6.6e-116 421.4 312 66.3
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.1e-114 416.4 277 72.9
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 8.9e-113 411.0 342 62.6
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 2.0e-112 409.8 261 75.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 7.6e-112 407.9 273 72.9
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.1e-109 399.8 309 65.4
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.4e-105 387.1 272 70.6
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 5.8e-104 381.7 313 62.6
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 1.4e-97 360.5 251 71.3
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 6.9e-97 358.2 299 60.5
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 2.6e-96 356.3 318 57.9
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.6e-93 345.5 234 72.2
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 3.0e-92 342.8 301 56.5
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 6.2e-90 335.1 221 73.3
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.1e-89 332.8 314 57.6
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 2.2e-87 326.6 338 52.1
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.4e-87 324.7 328 52.4
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 5.8e-80 302.0 206 70.4
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.1e-78 297.7 295 48.5
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 4.6e-77 292.4 200 71.0
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.1e-77 292.0 312 51.9
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.9e-71 273.1 201 67.2
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 4.2e-70 269.2 194 65.5
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 2.2e-66 256.9 325 42.8
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.8e-60 237.3 375 36.5
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 2.0e-59 233.8 258 46.5
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 6.5e-55 218.8 192 60.4
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.2e-47 193.7 312 37.8
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 1.6e-45 187.6 199 49.2
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.7e-42 176.4 127 65.4
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.6e-37 161.0 208 43.3
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.0e-36 158.3 107 71.0
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 3.1e-33 146.7 85 78.8
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 7.0e-33 145.6 85 78.8
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.3e-31 140.6 97 66.0
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 2.3e-31 140.6 98 69.4
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.1e-29 134.0 116 57.8
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 2.8e-29 133.7 230 36.5
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-28 131.0 91 70.3
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.2e-24 118.2 97 56.7
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.0e-23 115.2 289 26.6
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 6.0e-08 62.8 30 83.3
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.9e-07 60.1 44 65.9
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 6.6e-07 59.3 97 36.1


User provided reference genes

Program Settings