Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 2.1e-73 278.9 135 100.0
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 3.1e-56 221.9 135 77.8
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 5.8e-55 217.6 135 75.6
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 7.5e-55 217.2 135 76.3
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 7.5e-55 217.2 135 77.8
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 3.7e-54 214.9 135 75.6
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 3.7e-54 214.9 135 75.6
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.9e-53 212.6 135 74.1
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 2.0e-52 209.1 135 71.9
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 2.7e-52 208.8 135 74.1
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 4.6e-52 208.0 135 73.3
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 4.6e-52 208.0 136 73.5
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 6.0e-52 207.6 135 71.9
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 6.0e-52 207.6 135 71.9
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 1.3e-51 206.5 135 73.3
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 3.0e-51 205.3 135 71.9
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 5.0e-51 204.5 135 70.4
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 2.5e-50 202.2 135 71.1
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 5.6e-50 201.1 135 71.9
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 3.6e-49 198.4 135 69.6
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 4.7e-49 198.0 135 69.6
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 1.8e-48 196.1 135 68.1
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 1.7e-46 189.5 135 67.4
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.7e-46 189.5 135 70.4
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 6.4e-46 187.6 139 67.6
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 1.9e-45 186.0 135 67.4
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 5.4e-45 184.5 135 67.4
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 7.1e-45 184.1 139 67.6
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 1.2e-44 183.3 139 66.9
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 1.6e-44 183.0 135 66.7
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 3.5e-44 181.8 139 66.9
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 3.5e-44 181.8 139 66.9
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 4.6e-44 181.4 139 66.9
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 3.0e-43 178.7 139 66.2
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 3.0e-43 178.7 138 64.5
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 3.0e-43 178.7 135 63.7
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 1.9e-42 176.0 135 66.7
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 2.5e-42 175.6 139 64.7
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 2.5e-42 175.6 139 64.0
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 1.1e-40 170.2 135 60.0
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.5e-39 166.4 130 63.1
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.5e-39 166.4 117 67.5
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 9.9e-39 163.7 135 58.5
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 1.4e-37 159.8 186 50.0
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 1.9e-37 159.5 135 57.8
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 1.9e-37 159.5 145 56.6
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.2e-37 158.7 114 68.4
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 1.0e-35 153.7 114 65.8
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 1.3e-35 153.3 125 63.2
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 3.0e-35 152.1 125 64.8
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 3.6e-33 145.2 114 62.3
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 8.1e-33 144.1 191 47.6
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 2.0e-31 139.4 135 53.3
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.6e-28 129.8 128 57.0
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 3.0e-27 125.6 135 48.1
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.1e-26 123.6 114 55.3
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 2.8e-25 119.0 149 46.3
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 8.1e-25 117.5 75 70.7
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.2e-23 113.6 64 81.2
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 1.5e-23 113.2 138 45.7
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 4.5e-23 111.7 64 81.2
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 5.8e-23 111.3 139 46.8
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 5.8e-23 111.3 72 72.2
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 7.6e-23 110.9 172 39.5
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.3e-22 110.2 68 73.5
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 2.9e-22 109.0 77 70.1
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 1.1e-21 107.1 74 68.9
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 4.2e-21 105.1 73 64.4
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 7.1e-21 104.4 79 65.8
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 6.0e-20 101.3 138 42.8
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 1.0e-19 100.5 65 70.8
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 1.3e-19 100.1 65 70.8
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 1.8e-19 99.8 65 72.3
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 3.9e-19 98.6 72 66.7
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 5.6e-18 94.7 52 82.7
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 9.6e-18 94.0 72 62.5
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 1.3e-17 93.6 54 79.6
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 3.6e-17 92.0 51 80.4
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 8.1e-17 90.9 48 85.4
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 1.1e-16 90.5 158 32.3
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 1.4e-16 90.1 71 57.7
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 2.4e-16 89.4 65 67.7
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 5.3e-16 88.2 67 61.2
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 9.0e-16 87.4 52 76.9
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 3.4e-15 85.5 78 55.1
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 7.6e-15 84.3 71 57.7
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 9.9e-15 84.0 62 64.5
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 1.1e-13 80.5 142 38.0
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 1.9e-13 79.7 70 58.6
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 1.9e-13 79.7 59 62.7
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 2.1e-12 76.3 52 65.4
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 2.7e-12 75.9 77 50.6
Atru.chr5.886 Acer truncatum HOM05D007572 ORTHO05D009535 1.3e-11 73.6 57 63.2
Atru.chr5.889 Acer truncatum HOM05D007572 ORTHO05D009535 1.3e-11 73.6 57 63.2
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.5e-10 70.1 53 62.3
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.9e-10 69.7 52 63.5
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 1.3e-09 67.0 54 53.7
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 6.9e-08 61.2 55 54.5
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.0e-07 59.7 91 42.9
TAR365G0305 Trochodendron aralioides HOM05D007572 ORTHO05D009535 2.2e-06 56.2 52 53.8


User provided reference genes

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