Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 1.9e-216 756.9 978 100.0
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 1.1e-27 129.8 247 49.4
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 4.4e-11 74.7 150 42.7
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 5.7e-11 74.3 179 36.3
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 9.7e-11 73.6 149 45.6
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.1e-09 68.2 174 37.9
Eucgr.K01100 Eucalyptus grandis HOM05D020995 ORTHO05D010442 9.1e-09 67.0 52 69.2
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 1.6e-08 66.2 63 58.7
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 1.6e-08 66.2 63 58.7
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 7.7e-08 63.9 207 30.9
TAR626G0119 Trochodendron aralioides HOM05D008991 ORTHO05D038496 7.7e-08 63.9 76 50.0
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 1.7e-07 62.8 171 36.8
Manes.13G139000 Manihot esculenta HOM05D012920 ORTHO05D012188 1.7e-07 62.8 65 52.3
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 2.9e-07 62.0 209 35.4
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 2.9e-07 62.0 80 51.2
Gohir.A11G060200 Gossypium hirsutum HOM05D020995 ORTHO05D010442 2.9e-07 62.0 55 63.6
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 1.5e-06 59.7 103 40.8
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 2.5e-06 58.9 162 38.3
arahy.Tifrunner.gnm1.ann1.77K9F8 Arachis hypogaea HOM05D039677 ORTHO05D019822 3.2e-06 58.5 123 39.0
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 3.2e-06 58.5 149 38.9
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 5.5e-06 57.8 160 38.8
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 7.2e-06 57.4 148 38.5
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 7.2e-06 57.4 176 36.4
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 9.4e-06 57.0 159 37.7
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 9.4e-06 57.0 148 39.2
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 9.4e-06 57.0 148 39.2


User provided reference genes

Program Settings