Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3286 Punica granatum HOM05D006980 ORTHO05D008704 3.7e-120 436.0 225 100.0
Cfa016610 Carpinus fangiana HOM05D006980 ORTHO05D008704 1.9e-63 247.7 229 59.8
QL07p038724 Quercus lobata HOM05D006980 ORTHO05D008704 1.2e-62 245.0 166 68.7
Prupe.7G109800 Prunus persica HOM05D006980 ORTHO05D008704 2.7e-62 243.8 231 57.6
CiPaw.09G014400 Carya illinoinensis HOM05D006980 ORTHO05D008704 4.6e-62 243.0 233 57.5
Eucgr.G00971 Eucalyptus grandis HOM05D006980 ORTHO05D008704 6.0e-62 242.7 220 58.6
Manes.09G055100 Manihot esculenta HOM05D006980 ORTHO05D008704 2.5e-60 237.3 179 63.1
Potri.006G068700 Populus trichocarpa HOM05D006980 ORTHO05D008704 1.6e-59 234.6 179 63.1
QL07p038975 Quercus lobata HOM05D006980 ORTHO05D008704 6.2e-59 232.6 166 65.7
Sed0006527 Sechium edule HOM05D006980 ORTHO05D008704 1.8e-58 231.1 201 57.7
CANSAT64G1568 Cannabis sativa HOM05D006980 ORTHO05D008704 2.4e-58 230.7 212 57.1
CSS0041599 Camellia sinensis var. sinensis HOM05D006980 ORTHO05D008704 1.2e-57 228.4 228 56.1
Dinv21206 Davidia involucrata HOM05D006980 ORTHO05D008704 1.2e-57 228.4 224 58.0
RcHm_v2.0_Chr3g0473791 Rosa chinensis HOM05D006980 ORTHO05D008704 2.0e-57 227.6 221 54.8
Sc02g0000270 Simmondsia chinensis HOM05D006980 ORTHO05D008704 2.6e-57 227.3 212 54.7
TAR633G1277 Trochodendron aralioides HOM05D006980 ORTHO05D008704 7.6e-57 225.7 231 54.5
EL10Ac6g13708 Beta vulgaris HOM05D006980 ORTHO05D008704 1.7e-56 224.6 223 54.7
Lj1g0023344 Lotus japonicus HOM05D006980 ORTHO05D008704 2.9e-56 223.8 222 55.0
Actinidia05428 Actinidia chinensis HOM05D006980 ORTHO05D008704 8.4e-56 222.2 212 56.6
Ah.02g130100 Amaranthus hybridus HOM05D006980 ORTHO05D008704 1.9e-55 221.1 208 54.8
Thecc.05G089500 Theobroma cacao HOM05D006980 ORTHO05D008704 9.3e-55 218.8 213 54.5
TWI77G0642 Tripterygium wilfordii HOM05D006980 ORTHO05D008704 1.6e-54 218.0 210 54.3
FAN05G0999 Fragaria x ananassa HOM05D006980 ORTHO05D008704 1.0e-53 215.3 222 54.1
SHI12421 Sapria himalayana HOM05D006980 ORTHO05D008704 1.0e-53 215.3 179 58.1
COL.COLO4_29731 Corchorus olitorius HOM05D006980 ORTHO05D008704 1.7e-53 214.5 210 53.8
PSO541G2622 Papaver somniferum HOM05D006980 ORTHO05D008704 1.7e-53 214.5 225 52.9
Cc02_g28460 Coffea canephora HOM05D006980 ORTHO05D008704 5.1e-53 213.0 221 50.2
Ciclev10011570m.g Citrus clementina HOM05D006980 ORTHO05D008704 6.6e-53 212.6 206 54.9
Aqoxy2G01180 Aquilegia oxysepala HOM05D006980 ORTHO05D008704 8.7e-53 212.2 191 57.1
CsaV3_6G007180 Cucumis sativus L. HOM05D006980 ORTHO05D008704 8.7e-53 212.2 205 52.2
Rhsim03G0075000 Rhododendron simsii HOM05D006980 ORTHO05D008704 1.5e-52 211.5 169 63.9
Medtr7g104640 Medicago truncatula HOM05D006980 ORTHO05D008704 1.9e-52 211.1 175 56.0
Lsat_1_v5_gn_5_164841 Lactuca sativa HOM05D006980 ORTHO05D008704 3.3e-52 210.3 225 52.4
Atru.chr8.1533 Acer truncatum HOM05D006980 ORTHO05D008704 9.6e-52 208.8 179 58.7
Cpa.g.sc166.4 Carica papaya HOM05D006980 ORTHO05D008704 2.1e-51 207.6 231 49.8
ECA248G2176 Erigeron canadensis HOM05D006980 ORTHO05D008704 2.8e-51 207.2 227 50.7
arahy.Tifrunner.gnm1.ann1.IK7M5W Arachis hypogaea HOM05D006980 ORTHO05D008704 6.2e-51 206.1 172 56.4
MELO3C022409.2 Cucumis melo HOM05D006980 ORTHO05D008704 6.2e-51 206.1 205 50.7
HanXRQChr02g0032651 Helianthus annuus HOM05D006980 ORTHO05D008704 6.2e-51 206.1 180 57.2
arahy.Tifrunner.gnm1.ann1.3P0NFT Arachis hypogaea HOM05D006980 ORTHO05D008704 8.1e-51 205.7 172 56.4
SalBow3G1904 Salvia bowleyana HOM05D006980 ORTHO05D008704 1.1e-50 205.3 214 50.9
AUR62005415 Chenopodium quinoa HOM05D006980 ORTHO05D008704 1.4e-50 204.9 209 53.6
AUR62014076 Chenopodium quinoa HOM05D006980 ORTHO05D008704 1.4e-50 204.9 209 53.1
PSO675G7214 Papaver somniferum HOM05D006980 ORTHO05D008704 1.4e-50 204.9 226 51.8
Nitab4.5_0000025g0100 Nicotiana tabacum HOM05D006980 ORTHO05D008704 3.1e-50 203.8 224 47.8
Nitab4.5_0003259g0020 Nicotiana tabacum HOM05D006980 ORTHO05D008704 6.9e-50 202.6 224 47.3
TPR.G19555 Trifolium pratense HOM05D006980 ORTHO05D008704 9.0e-50 202.2 206 51.9
MSTRG.19261 Avicennia marina HOM05D006980 ORTHO05D008704 1.2e-49 201.8 212 52.4
THA.LOC104804920 Tarenaya hassleriana HOM05D006980 ORTHO05D008704 1.5e-49 201.4 206 51.0
CARHR130480 Cardamine hirsuta HOM05D006980 ORTHO05D008704 3.4e-49 200.3 215 49.8
Lj2P137T25 Lonicera japonica HOM05D006980 ORTHO05D008704 3.4e-49 200.3 148 63.5
Migut.J01034 Erythranthe guttata HOM05D006980 ORTHO05D008704 4.5e-49 199.9 201 51.7
Peaxi162Scf00045g00156 Petunia axillaris HOM05D006980 ORTHO05D008704 5.8e-49 199.5 167 55.1
Aa31LG5G21360 Aethionema arabicum HOM05D006980 ORTHO05D008704 7.6e-49 199.1 201 50.7
BcaB02g09370 Brassica carinata HOM05D006980 ORTHO05D008704 2.2e-48 197.6 209 47.8
Lalb_Chr20g0111701 Lupinus albus HOM05D006980 ORTHO05D008704 2.9e-48 197.2 182 57.1
PGSC0003DMG401009543 Solanum tuberosum HOM05D006980 ORTHO05D008704 2.9e-48 197.2 224 46.4
Sopen08g002140 Solanum pennellii HOM05D006980 ORTHO05D008704 6.4e-48 196.1 224 46.0
Solyc08g006170.1 Solanum lycopersicum HOM05D006980 ORTHO05D008704 8.4e-48 195.7 224 46.0
Nn6g34894 Nelumbo nucifera HOM05D006980 ORTHO05D008704 2.4e-47 194.1 199 55.3
Sp4g18460 Schrenkiella parvula HOM05D006980 ORTHO05D008704 2.4e-47 194.1 213 48.8
Eucgr.G00972 Eucalyptus grandis HOM05D006980 ORTHO05D008704 3.2e-47 193.7 215 51.2
AL4G32340 Arabidopsis lyrata HOM05D006980 ORTHO05D008704 4.2e-47 193.4 213 48.4
CAN.G2030.1 Capsicum annuum HOM05D006980 ORTHO05D008704 4.2e-47 193.4 224 46.9
CAN.G137.42 Capsicum annuum HOM05D006980 ORTHO05D008704 9.3e-47 192.2 162 55.6
AT2G36240 Arabidopsis thaliana HOM05D006980 ORTHO05D008704 1.2e-46 191.8 194 49.5
Oeu056884.1 Olea europaea HOM05D006980 ORTHO05D008704 4.6e-46 189.9 170 54.7
ClCG06G001250 Citrullus lanatus HOM05D006980 ORTHO05D008704 2.3e-45 187.6 204 49.5
ATR0051G062 Amborella trichopoda HOM05D006980 ORTHO05D008704 1.9e-44 184.5 221 45.2
C04p11900 Brassica napus HOM05D006980 ORTHO05D008704 7.4e-44 182.6 180 50.6
CDE06G1324 Ceratophyllum demersum HOM05D004140 ORTHO05D006116 7.4e-44 182.6 225 46.7
SGA_v2.0_scaffold13G06715 Striga asiatica HOM05D006980 ORTHO05D008704 9.6e-44 182.2 211 46.4
BcaC02g11726 Brassica carinata HOM05D006980 ORTHO05D008704 1.6e-43 181.4 221 45.7
BcaC02g11728 Brassica carinata HOM05D006980 ORTHO05D008704 1.6e-43 181.4 221 45.7
Duzib106G0372 Durio zibethinus HOM05D006980 ORTHO05D008704 1.6e-43 181.4 223 48.4
BcaC02g11732 Brassica carinata HOM05D006980 ORTHO05D008704 4.8e-43 179.9 207 46.4
BolC4t22838H Brassica oleracea HOM05D006980 ORTHO05D008704 4.8e-43 179.9 207 46.4
BraA05t19913Z Brassica rapa HOM05D006980 ORTHO05D008704 6.9e-42 176.0 203 47.3
BcaC02g11731 Brassica carinata HOM05D006980 ORTHO05D008704 1.5e-41 174.9 140 53.6
GSVIVG01029738001 Vitis vinifera HOM05D006980 ORTHO05D008704 2.0e-41 174.5 225 47.1
A05p09600 Brassica napus HOM05D006980 ORTHO05D008704 2.6e-41 174.1 204 46.1
Gorai.009G402600 Gossypium raimondii HOM05D006980 ORTHO05D008704 7.6e-41 172.6 217 46.5
Cc00_g27900 Coffea canephora HOM05D006980 ORTHO05D008704 6.4e-40 169.5 212 44.3
Phvul.001G190300 Phaseolus vulgaris HOM05D006980 ORTHO05D008704 3.2e-39 167.2 196 45.4
HPP92_011900 Vanilla planifolia HOM05D006980 ORTHO05D008704 1.2e-38 165.2 179 48.0
Glyma.03G196000 Glycine max HOM05D006980 ORTHO05D008704 3.5e-38 163.7 158 51.3
BcaB02g09372 Brassica carinata HOM05D006980 ORTHO05D008704 4.6e-38 163.3 222 42.8
VMungo1383G3509 Vigna mungo HOM05D006980 ORTHO05D008704 6.7e-37 159.5 200 44.5
GSVIVG01015930001 Vitis vinifera HOM05D006980 ORTHO05D008704 4.8e-35 153.3 213 45.1
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 6.2e-35 152.9 117 61.5
SEGI_13947 Sequoiadendron giganteum HOM05D006980 ORTHO05D008704 3.1e-34 150.6 189 41.8
SEGI_40503 Sequoiadendron giganteum HOM05D006980 ORTHO05D008704 3.1e-34 150.6 189 41.8
Thhalv10016603m.g Eutrema salsugineum HOM05D006980 ORTHO05D008704 2.2e-32 144.4 187 41.2
Haze_19614 Corylus avellana HOM05D006980 ORTHO05D008704 3.8e-32 143.7 108 62.0
arahy.Tifrunner.gnm1.ann1.FQN2WV Arachis hypogaea HOM05D006980 ORTHO05D008704 1.1e-31 142.1 110 60.9
Sabra06G0051200 Salix brachista HOM05D006980 ORTHO05D008704 1.4e-31 141.7 107 62.6
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 1.6e-27 128.3 219 40.2
FAN02G3599 Fragaria x ananassa HOM05D006980 ORTHO05D008704 4.8e-27 126.7 107 57.9
Ca_09007_v3 Cicer arietinum L. HOM05D006980 ORTHO05D008704 9.0e-26 122.5 107 55.1
DCAR_013476 Daucus carota HOM05D006980 ORTHO05D008704 8.5e-24 115.9 88 60.2
Psat3g033240 Pisum sativum HOM05D006980 ORTHO05D008704 3.0e-21 107.5 107 49.5
Os01g0908800 Oryza sativa ssp. japonica HOM05D006980 ORTHO05D008704 5.5e-15 86.7 205 34.6
Zm00001eb365120 Zea mays HOM05D006980 ORTHO05D008704 5.1e-13 80.1 208 31.2
Ciclev10028524m.g Citrus clementina HOM05D007402 ORTHO05D003673 2.5e-07 61.2 138 28.3
ATR0068G034 Amborella trichopoda HOM05D007402 ORTHO05D003673 3.2e-07 60.8 161 28.0
SEGI_04521 Sequoiadendron giganteum HOM05D005337 ORTHO05D009920 5.5e-07 60.1 126 31.0
MBI06_g43058_MAGBIO Magnolia biondii HOM05D007402 ORTHO05D003673 1.2e-06 58.9 181 28.7
ECA234G2429 Erigeron canadensis HOM05D004271 ORTHO05D006011 2.1e-06 58.2 122 32.0
Manes.11G141800 Manihot esculenta HOM05D007402 ORTHO05D003673 4.7e-06 57.0 140 27.9
SHI04033 Sapria himalayana HOM05D007157 ORTHO05D009045 4.7e-06 57.0 128 25.8


User provided reference genes

Program Settings