Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3274 Punica granatum HOM05D007665 ORTHO05D008293 5.5e-136 487.6 250 100.0
Potri.018G090000 Populus trichocarpa HOM05D007665 ORTHO05D008293 5.3e-30 135.6 291 38.5
Cfa013407 Carpinus fangiana HOM05D007665 ORTHO05D008293 2.1e-26 123.6 293 36.5
CANSAT11G1651 Cannabis sativa HOM05D007665 ORTHO05D008293 4.7e-26 122.5 289 37.0
QL11p005089 Quercus lobata HOM05D007665 ORTHO05D008293 1.4e-25 120.9 304 34.9
Potri.006G165500 Populus trichocarpa HOM05D007665 ORTHO05D008293 5.2e-25 119.0 294 38.1
CiPaw.07G194500 Carya illinoinensis HOM05D007665 ORTHO05D008293 6.7e-25 118.6 303 37.6
CiPaw.08G034700 Carya illinoinensis HOM05D007665 ORTHO05D008293 8.8e-25 118.2 302 35.1
Gohir.A08G083600 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.7e-23 112.8 299 34.8
Gohir.D08G093300 Gossypium hirsutum HOM05D007665 ORTHO05D008293 1.8e-22 110.5 298 33.6
Gorai.004G098900 Gossypium raimondii HOM05D007665 ORTHO05D008293 1.8e-22 110.5 298 33.6
Duzib150G0483 Durio zibethinus HOM05D007665 ORTHO05D008293 5.3e-22 109.0 308 34.7
MD16G1253900 Malus domestica HOM05D007665 ORTHO05D008293 1.6e-21 107.5 301 30.6
COL.COLO4_35626 Corchorus olitorius HOM05D007665 ORTHO05D008293 2.0e-21 107.1 300 32.3
Eucgr.C00139 Eucalyptus grandis HOM05D007665 ORTHO05D008293 4.5e-21 105.9 302 37.4
TWI34G1272 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 4.5e-21 105.9 292 33.6
Haze_21953 Corylus avellana HOM05D007665 ORTHO05D008293 5.9e-21 105.5 224 38.4
Sabra06G0127300 Salix brachista HOM05D007665 ORTHO05D008293 5.9e-21 105.5 296 34.1
RcHm_v2.0_Chr4g0400841 Rosa chinensis HOM05D007665 ORTHO05D008293 1.0e-20 104.8 309 32.4
Sed0009659 Sechium edule HOM05D007665 ORTHO05D008293 1.3e-20 104.4 294 32.3
Prupe.1G081700 Prunus persica HOM05D007665 ORTHO05D008293 2.9e-20 103.2 301 30.6
Sabra18G0077500 Salix brachista HOM05D007665 ORTHO05D008293 2.9e-20 103.2 301 33.2
Dinv19563 Davidia involucrata HOM05D007665 ORTHO05D008293 3.8e-20 102.8 282 33.0
Manes.06G022200 Manihot esculenta HOM05D007665 ORTHO05D008293 3.8e-20 102.8 289 34.3
ClCG06G013480 Citrullus lanatus HOM05D007665 ORTHO05D008293 1.5e-19 100.9 304 30.9
MELO3C017449.2 Cucumis melo HOM05D007665 ORTHO05D008293 4.2e-19 99.4 314 33.1
Thecc.09G178300 Theobroma cacao HOM05D007665 ORTHO05D008293 1.6e-18 97.4 293 33.4
Glyma.15G163200 Glycine max HOM05D007665 ORTHO05D008293 2.1e-18 97.1 312 34.3
arahy.Tifrunner.gnm1.ann1.HIJU8F Arachis hypogaea HOM05D007665 ORTHO05D008293 2.7e-18 96.7 221 35.7
FvH4_4g07760 Fragaria vesca HOM05D007665 ORTHO05D008293 2.7e-18 96.7 313 30.0
FAN12G1950 Fragaria x ananassa HOM05D007665 ORTHO05D008293 2.7e-18 96.7 313 30.0
MD13G1247000 Malus domestica HOM05D007665 ORTHO05D008293 2.7e-18 96.7 232 33.6
Phvul.003G143500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 3.6e-18 96.3 300 33.3
Glyma.13G098200 Glycine max HOM05D007665 ORTHO05D008293 6.1e-18 95.5 282 33.7
TPR.G9242 Trifolium pratense HOM05D007665 ORTHO05D008293 6.1e-18 95.5 289 31.1
arahy.Tifrunner.gnm1.ann1.38WMVK Arachis hypogaea HOM05D007665 ORTHO05D008293 8.0e-18 95.1 214 36.9
Medtr2g036740 Medicago truncatula HOM05D007665 ORTHO05D008293 1.0e-17 94.7 275 32.4
CsaV3_1G031740 Cucumis sativus L. HOM05D007665 ORTHO05D008293 1.4e-17 94.4 308 32.1
FAN17G2593 Fragaria x ananassa HOM05D007665 ORTHO05D008293 1.4e-17 94.4 313 29.7
Glyma.09G056900 Glycine max HOM05D007665 ORTHO05D008293 1.4e-17 94.4 313 33.5
Manes.14G158020 Manihot esculenta HOM05D007665 ORTHO05D008293 1.4e-17 94.4 307 33.6
Cpa.g.c26900 Carica papaya HOM05D007665 ORTHO05D008293 5.2e-17 92.4 323 30.3
TWI32G1073 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 5.2e-17 92.4 223 35.4
FAN07G1410 Fragaria x ananassa HOM05D007665 ORTHO05D008293 6.8e-17 92.0 312 30.1
Sed0009111 Sechium edule HOM05D007665 ORTHO05D008293 1.2e-16 91.3 263 34.2
FAN22G0501 Fragaria x ananassa HOM05D007665 ORTHO05D008293 3.4e-16 89.7 312 29.5
Phvul.009G238500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 7.5e-16 88.6 313 32.3
Ciclev10009102m.g Citrus clementina HOM05D007665 ORTHO05D008293 1.3e-15 87.8 295 31.5
VMungo1215G3214 Vigna mungo HOM05D007665 ORTHO05D008293 2.2e-15 87.0 301 32.2
Atru.chr7.835 Acer truncatum HOM05D007665 ORTHO05D008293 2.8e-15 86.7 270 33.7
Glyma.17G061500 Glycine max HOM05D007665 ORTHO05D008293 2.8e-15 86.7 286 33.2
Lalb_Chr18g0052461 Lupinus albus HOM05D007665 ORTHO05D008293 1.1e-14 84.7 303 30.7
VMungo1309G2535 Vigna mungo HOM05D007665 ORTHO05D008293 1.4e-14 84.3 317 31.5
Psat1g146200 Pisum sativum HOM05D007665 ORTHO05D008293 1.8e-14 84.0 269 32.7
Ca_21241_v3 Cicer arietinum L. HOM05D007665 ORTHO05D008293 5.4e-14 82.4 195 35.4
BcaC04g19976 Brassica carinata HOM05D010683 ORTHO05D008293 7.0e-14 82.0 195 34.4
C09p49230 Brassica napus HOM05D010683 ORTHO05D008293 7.0e-14 82.0 195 34.4
BolC9t57773H Brassica oleracea HOM05D010683 ORTHO05D008293 7.0e-14 82.0 195 34.4
A10p14800 Brassica napus HOM05D010683 ORTHO05D008293 2.0e-13 80.5 195 32.8
TAR625G0485 Trochodendron aralioides HOM05D007665 ORTHO05D008293 2.0e-13 80.5 321 29.9
Gohir.A08G019000 Gossypium hirsutum HOM05D007665 ORTHO05D008293 2.7e-13 80.1 145 40.7
Lalb_Chr15g0084041 Lupinus albus HOM05D007665 ORTHO05D008293 3.5e-13 79.7 244 32.0
Psat0s2178g0120 Pisum sativum HOM05D007665 ORTHO05D008293 3.5e-13 79.7 158 40.5
Gorai.009G003800 Gossypium raimondii HOM05D007665 ORTHO05D008293 5.9e-13 79.0 248 31.9
A02p08580 Brassica napus HOM05D010683 ORTHO05D008293 7.7e-13 78.6 242 32.6
BraA02t05927Z Brassica rapa HOM05D010683 ORTHO05D008293 7.7e-13 78.6 242 32.6
Medtr4g127680 Medicago truncatula HOM05D007665 ORTHO05D008293 7.7e-13 78.6 143 37.8
GSVIVG01029234001 Vitis vinifera HOM05D007665 ORTHO05D008293 1.3e-12 77.8 209 35.9
Lj4g0023476 Lotus japonicus HOM05D007665 ORTHO05D008293 1.7e-12 77.4 224 33.5
arahy.Tifrunner.gnm1.ann1.6P3KM7 Arachis hypogaea HOM05D007665 ORTHO05D008293 2.3e-12 77.0 129 38.8
TPR.G5363 Trifolium pratense HOM05D007665 ORTHO05D008293 2.3e-12 77.0 217 36.4
Gohir.D05G004100 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.8e-12 76.3 173 35.3
arahy.Tifrunner.gnm1.ann1.D7NBKG Arachis hypogaea HOM05D007665 ORTHO05D008293 1.1e-11 74.7 122 39.3
Gorai.004G027000 Gossypium raimondii HOM05D007665 ORTHO05D008293 1.1e-11 74.7 148 39.2
Gohir.A05G003700 Gossypium hirsutum HOM05D007665 ORTHO05D008293 2.5e-11 73.6 254 31.1
Lalb_Chr12g0199491 Lupinus albus HOM05D007665 ORTHO05D008293 4.2e-11 72.8 221 33.0
BcaB08g36093 Brassica carinata HOM05D010683 ORTHO05D008293 7.2e-11 72.0 228 29.8
Rhsim01G0002100 Rhododendron simsii HOM05D007665 ORTHO05D008293 1.6e-10 70.9 292 29.8
Actinidia01304 Actinidia chinensis HOM05D007665 ORTHO05D008293 2.8e-10 70.1 152 38.2
Hma1.2p1_1303F.1_g274400 Hydrangea macrophylla HOM05D007665 ORTHO05D008293 4.7e-10 69.3 234 31.6
Lj6g0002099 Lotus japonicus HOM05D007665 ORTHO05D008293 1.0e-09 68.2 316 28.2
Sp6g19060 Schrenkiella parvula HOM05D010683 ORTHO05D008293 1.0e-09 68.2 230 30.9
Thhalv10014550m.g Eutrema salsugineum HOM05D010683 ORTHO05D008293 2.3e-09 67.0 248 29.4
THA.LOC104813513 Tarenaya hassleriana HOM05D007665 ORTHO05D008293 2.3e-09 67.0 138 35.5
Lalb_Chr13g0300111 Lupinus albus HOM05D007665 ORTHO05D008293 8.8e-09 65.1 197 34.0
THA.LOC104811782 Tarenaya hassleriana HOM05D007665 ORTHO05D008293 3.4e-08 63.2 122 40.2
BcaC03g14162 Brassica carinata HOM05D010683 ORTHO05D008293 4.4e-08 62.8 54 59.3
AT5G57340 Arabidopsis thaliana HOM05D010683 ORTHO05D008293 5.7e-08 62.4 140 37.1
MSTRG.6233 Avicennia marina HOM05D007665 ORTHO05D008293 2.2e-07 60.5 178 33.1
Carub.0008s1785 Capsella rubella HOM05D010683 ORTHO05D008293 2.2e-07 60.5 103 40.8
AL8G33310 Arabidopsis lyrata HOM05D010683 ORTHO05D008293 3.7e-07 59.7 75 46.7
C02p14330 Brassica napus HOM05D010683 ORTHO05D008293 3.7e-07 59.7 54 57.4
BolC2t07559H Brassica oleracea HOM05D010683 ORTHO05D008293 3.7e-07 59.7 54 57.4
Cc06_g13100 Coffea canephora HOM05D007665 ORTHO05D008293 3.7e-07 59.7 300 26.7
BcaB05g22338 Brassica carinata HOM05D010683 ORTHO05D008293 4.9e-07 59.3 196 29.1
CARHR271130 Cardamine hirsuta HOM05D010683 ORTHO05D008293 4.9e-07 59.3 246 27.2
MBI16_g38083_MAGBIO Magnolia biondii HOM05D007665 ORTHO05D008293 8.3e-07 58.5 132 35.6
Lsat_1_v5_gn_5_85601 Lactuca sativa HOM05D007665 ORTHO05D008293 1.1e-06 58.2 177 30.5
Aa31LG3G13210 Aethionema arabicum HOM05D010683 ORTHO05D008293 4.1e-06 56.2 137 37.2
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 9.2e-06 55.1 88 40.9


User provided reference genes

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