Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 8.7e-102 373.6 188 100.0
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 7.0e-59 231.1 189 65.1
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 2.5e-56 222.6 196 59.2
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 9.5e-56 220.7 195 62.1
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 2.8e-55 219.2 195 61.5
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 1.0e-54 217.2 200 58.5
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 3.0e-54 215.7 153 72.5
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 3.0e-54 215.7 197 59.4
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 2.0e-53 213.0 194 59.3
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 2.6e-53 212.6 195 60.0
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 3.4e-53 212.2 170 63.5
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 2.2e-52 209.5 197 56.9
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 2.9e-52 209.1 191 58.1
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 4.9e-52 208.4 184 65.2
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 4.9e-52 208.4 188 64.4
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 8.3e-52 207.6 193 59.1
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 8.3e-52 207.6 182 63.2
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 1.8e-51 206.5 166 63.9
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 9.2e-51 204.1 195 58.5
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 1.2e-50 203.8 197 58.4
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 2.0e-50 203.0 180 62.2
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 2.7e-50 202.6 182 61.5
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 3.5e-50 202.2 199 57.8
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 4.6e-50 201.8 195 56.4
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 5.9e-50 201.4 196 55.6
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 2.3e-49 199.5 199 57.3
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 2.3e-49 199.5 176 63.1
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 3.9e-49 198.7 162 62.3
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 6.6e-49 198.0 158 67.1
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 1.1e-48 197.2 187 58.3
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.5e-48 196.1 148 64.9
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 3.3e-48 195.7 191 56.5
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 4.7e-47 191.8 161 61.5
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 6.2e-47 191.4 141 69.5
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 1.1e-46 190.7 182 54.9
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 1.1e-46 190.7 191 56.0
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 1.8e-46 189.9 190 54.2
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 2.3e-46 189.5 194 55.2
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.3e-46 189.5 146 66.4
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 4.0e-46 188.7 165 59.4
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 4.0e-46 188.7 191 55.5
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 4.0e-46 188.7 184 55.4
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 6.8e-46 188.0 191 55.0
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 8.9e-46 187.6 192 55.2
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 8.9e-46 187.6 192 55.2
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 8.9e-46 187.6 192 55.2
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 1.2e-45 187.2 178 57.9
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 2.0e-45 186.4 146 64.4
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 4.4e-45 185.3 188 52.7
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 4.4e-45 185.3 187 55.6
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 5.8e-45 184.9 189 52.9
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 7.5e-45 184.5 190 53.7
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 9.8e-45 184.1 192 56.2
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 9.8e-45 184.1 185 56.8
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 2.2e-44 183.0 196 52.6
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 4.9e-44 181.8 197 52.3
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 1.1e-43 180.6 198 51.5
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 3.2e-43 179.1 102 84.3
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 3.2e-43 179.1 106 79.2
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 4.1e-43 178.7 192 52.6
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 1.6e-42 176.8 117 70.9
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.6e-42 176.8 195 52.8
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 3.5e-42 175.6 198 51.0
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 3.5e-42 175.6 105 80.0
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 6.0e-42 174.9 193 50.3
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 6.0e-42 174.9 186 50.5
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 7.8e-42 174.5 106 74.5
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 1.0e-41 174.1 156 59.6
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 1.0e-41 174.1 168 57.7
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 1.3e-41 173.7 166 54.8
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 1.3e-41 173.7 142 62.7
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 1.3e-41 173.7 183 53.0
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 2.3e-41 172.9 189 49.2
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 5.0e-41 171.8 191 51.3
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 8.6e-41 171.0 108 72.2
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 3.3e-40 169.1 148 57.4
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 4.3e-40 168.7 197 49.7
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 5.6e-40 168.3 173 52.6
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 5.6e-40 168.3 158 53.2
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 5.6e-40 168.3 165 53.3
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 5.6e-40 168.3 181 50.8
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 5.6e-40 168.3 173 55.5
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 7.3e-40 167.9 197 51.8
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 1.2e-39 167.2 198 48.0
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 1.6e-39 166.8 111 72.1
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 2.1e-39 166.4 187 51.3
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 3.1e-38 162.5 116 69.0
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 4.0e-38 162.2 194 47.9
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 1.5e-37 160.2 112 69.6
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 2.6e-37 159.5 121 63.6
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 3.4e-37 159.1 93 76.3
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 4.4e-37 158.7 127 64.6
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 7.5e-37 157.9 84 89.3
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 1.7e-36 156.8 112 67.0
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 1.7e-36 156.8 112 67.9
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 2.2e-36 156.4 112 67.9
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 2.2e-36 156.4 180 50.0
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 2.9e-36 156.0 193 47.7
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 3.7e-36 155.6 112 67.0
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 3.7e-36 155.6 112 67.0
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 6.4e-36 154.8 192 49.0
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 6.4e-36 154.8 194 48.5
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 6.4e-36 154.8 152 55.9
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 8.3e-36 154.5 111 67.6
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 1.1e-35 154.1 193 46.6
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 1.9e-35 153.3 193 46.6
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.4e-35 151.8 238 40.3
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 1.2e-34 150.6 99 70.7
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.2e-34 150.6 99 70.7
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.1e-34 149.8 99 71.7
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 7.8e-34 147.9 99 69.7
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 7.8e-34 147.9 99 69.7
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 4.7e-31 138.7 77 77.9
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 1.4e-30 137.1 95 64.2
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 3.4e-29 132.5 186 41.4
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 5.8e-29 131.7 166 42.8
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 9.2e-27 124.4 89 61.8
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.3e-25 120.6 96 63.5
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.3e-25 119.8 103 58.3
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 1.1e-24 117.5 89 59.6
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 1.1e-24 117.5 88 60.2
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 8.1e-23 111.3 72 69.4
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 2.2e-20 103.2 111 45.9
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 4.9e-20 102.1 161 40.4
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 1.9e-19 100.1 101 49.5
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 9.3e-19 97.8 103 51.5
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 5.1e-17 92.0 63 66.7
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.2e-15 85.1 90 51.1
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.2e-15 85.1 63 65.1
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 5.8e-13 78.6 72 50.0
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 1.3e-12 77.4 148 35.1
Cfa025074 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.6e-10 70.5 70 44.3
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 2.7e-10 69.7 105 35.2
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 4.6e-10 68.9 72 45.8
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 6.0e-10 68.6 82 48.8
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 1.8e-09 67.0 40 77.5


User provided reference genes

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