Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.4e-179 632.1 330 100.0
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 7.1e-131 471.1 330 76.4
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 1.2e-130 470.3 331 77.0
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 4.6e-130 468.4 333 75.7
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 3.9e-129 465.3 339 74.6
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 3.3e-128 462.2 282 83.3
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 9.5e-128 460.7 300 79.7
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.1e-127 459.5 330 75.5
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 2.1e-127 459.5 286 81.1
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.1e-127 459.5 335 74.6
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 3.6e-127 458.8 331 75.5
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 6.2e-127 458.0 335 74.3
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 8.1e-127 457.6 282 82.3
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.1e-126 457.2 282 82.6
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 2.4e-126 456.1 279 82.8
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.4e-126 456.1 335 74.0
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 5.2e-126 454.9 332 74.4
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 5.2e-126 454.9 322 73.9
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 6.8e-126 454.5 333 74.5
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 6.8e-126 454.5 311 75.6
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 8.9e-126 454.1 323 74.0
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 8.9e-126 454.1 334 73.7
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 2.0e-125 453.0 335 72.8
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 2.0e-125 453.0 291 78.7
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 2.6e-125 452.6 332 72.6
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 3.4e-125 452.2 330 74.8
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 5.8e-125 451.4 329 73.3
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 5.8e-125 451.4 330 74.2
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 9.9e-125 450.7 331 73.1
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 9.9e-125 450.7 331 73.4
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 9.9e-125 450.7 333 71.8
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.7e-124 449.9 330 71.8
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.7e-124 449.9 333 71.8
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 3.8e-124 448.7 315 74.6
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 3.8e-124 448.7 331 72.8
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 3.8e-124 448.7 333 71.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 6.4e-124 448.0 303 76.6
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 8.4e-124 447.6 297 77.1
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 8.4e-124 447.6 288 78.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 2.4e-123 446.0 282 80.1
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.2e-123 445.7 293 78.8
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 7.1e-123 444.5 289 77.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.1e-123 444.5 273 81.7
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.2e-122 443.7 335 70.7
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.1e-122 443.0 332 73.5
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 2.7e-122 442.6 288 77.8
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.5e-122 442.2 308 73.7
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.5e-122 442.2 288 77.1
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 4.6e-122 441.8 304 74.3
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 6.0e-122 441.4 288 77.1
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 7.8e-122 441.0 305 75.4
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.8e-122 441.0 311 74.6
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 7.8e-122 441.0 331 71.9
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.3e-121 440.3 331 72.2
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 1.7e-121 439.9 288 76.7
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 1.7e-121 439.9 288 76.7
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.3e-121 439.5 336 70.8
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.9e-121 438.7 289 76.5
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 3.9e-121 438.7 306 74.5
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 3.9e-121 438.7 288 76.7
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 6.6e-121 438.0 305 74.4
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.1e-120 437.2 316 72.2
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.1e-120 437.2 301 75.1
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.5e-120 436.8 301 74.1
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.5e-120 436.8 325 69.2
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.9e-120 436.4 292 74.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.9e-120 436.4 301 75.1
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 2.5e-120 436.0 301 74.1
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 2.5e-120 436.0 326 69.0
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 3.3e-120 435.6 329 71.7
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 4.3e-120 435.3 310 72.9
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 9.6e-120 434.1 301 74.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 9.6e-120 434.1 332 71.4
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.1e-119 433.0 329 70.5
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 3.6e-119 432.2 330 67.9
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 4.8e-119 431.8 323 70.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 3.1e-118 429.1 296 74.3
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 4.0e-118 428.7 316 72.2
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 6.9e-118 427.9 304 73.4
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 5.8e-117 424.9 316 70.9
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.3e-116 423.7 260 81.2
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 9.3e-115 417.5 329 67.5
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 3.9e-113 412.1 311 70.4
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.1e-112 410.6 307 70.7
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.5e-112 409.5 233 87.1
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.6e-111 406.8 239 84.5
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.6e-111 406.8 239 84.5
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.4e-110 403.7 332 68.4
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.2e-109 400.6 233 85.0
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 2.2e-108 396.4 312 67.0
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 4.9e-108 395.2 281 73.3
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 4.9e-108 395.2 290 70.3
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 8.4e-108 394.4 239 81.2
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.1e-107 394.0 329 63.8
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 1.1e-107 394.0 302 71.2
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.9e-104 383.3 306 68.3
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.5e-104 382.9 297 69.4
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 5.6e-104 381.7 242 78.1
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.6e-101 372.9 279 67.4
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 2.1e-98 363.2 300 62.3
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 5.1e-97 358.6 286 63.3
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 4.8e-95 352.1 302 61.3
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.0e-93 346.7 211 81.0
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.5e-88 329.7 275 63.3
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.7e-87 325.9 270 60.4
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 3.7e-87 325.9 319 56.7
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 7.7e-85 318.2 325 56.0
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 2.6e-77 293.1 277 55.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.8e-68 262.7 215 67.4
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 7.2e-67 258.5 312 52.9
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 8.2e-63 245.0 241 56.8
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 7.0e-62 241.9 230 60.4
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.2e-53 214.5 161 68.9
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 2.3e-49 200.3 145 71.0
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 3.2e-38 163.3 103 71.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 5.4e-22 109.4 68 75.0
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.8e-18 97.1 93 54.8
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.5e-08 64.7 64 60.9
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.9e-06 57.8 127 40.2


User provided reference genes

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