Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 5.7e-206 720.7 367 100.0
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.2e-149 532.7 370 73.8
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 2.7e-139 499.2 336 71.4
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 2.7e-139 499.2 368 69.6
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 3.0e-138 495.7 355 70.4
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 3.0e-138 495.7 332 71.1
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 8.7e-138 494.2 374 65.5
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 9.6e-137 490.7 365 66.0
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 9.6e-137 490.7 322 72.7
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-136 490.0 336 70.2
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.6e-136 490.0 338 70.1
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.6e-136 490.0 332 70.5
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 3.6e-136 488.8 336 69.6
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.1e-135 487.3 329 71.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.1e-135 487.3 329 69.6
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.1e-135 487.3 365 66.0
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.8e-135 486.5 336 69.6
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 1.8e-135 486.5 322 70.2
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.4e-135 486.1 329 69.6
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 2.4e-135 486.1 365 66.3
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 6.9e-135 484.6 337 71.5
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 6.9e-135 484.6 370 66.5
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.0e-134 483.0 370 66.2
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.0e-134 483.0 370 66.2
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 3.4e-134 482.3 365 66.0
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 4.5e-134 481.9 331 69.8
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 7.6e-134 481.1 324 71.9
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.3e-133 480.3 328 71.0
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.7e-133 479.9 365 66.6
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.7e-133 479.9 367 66.2
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.7e-133 479.9 323 70.3
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 4.9e-133 478.4 328 70.7
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 4.9e-133 478.4 335 69.9
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 6.4e-133 478.0 328 70.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 8.4e-133 477.6 352 66.5
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 8.4e-133 477.6 372 65.9
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 2.4e-132 476.1 349 65.9
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 4.2e-132 475.3 326 70.6
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 7.1e-132 474.6 333 67.3
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 1.2e-131 473.8 322 70.2
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 3.5e-131 472.2 329 68.4
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.6e-131 471.9 328 68.3
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 4.6e-131 471.9 323 69.7
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.0e-130 470.7 332 68.1
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 8.7e-130 467.6 336 67.3
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.1e-129 467.2 331 67.7
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.1e-129 467.2 345 66.1
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.1e-129 467.2 339 67.6
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 2.5e-129 466.1 334 66.5
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 3.3e-129 465.7 336 68.2
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 1.6e-128 463.4 329 68.1
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.1e-127 460.7 346 65.3
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 5.3e-127 458.4 336 65.5
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 9.0e-127 457.6 348 66.1
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 2.4e-124 449.5 380 62.1
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.5e-121 440.3 391 58.8
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 3.2e-116 422.5 279 72.0
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 4.2e-116 422.2 335 62.7
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 4.2e-116 422.2 438 51.8
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 7.9e-115 417.9 313 67.4
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 1.3e-112 410.6 283 71.7
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.2e-109 399.8 304 67.4
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 2.1e-107 393.3 330 59.7
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 3.6e-107 392.5 278 66.9
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 7.9e-107 391.3 278 66.9
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.1e-105 387.5 279 68.1
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.1e-103 379.4 338 56.8
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.9e-100 370.2 267 67.4
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.2e-100 369.4 290 64.5
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 9.4e-100 367.9 321 56.1
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 9.4e-100 367.9 325 54.2
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.6e-94 349.7 211 86.7
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 7.7e-94 348.2 326 51.8
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 8.5e-93 344.7 333 56.5
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 5.3e-87 325.5 350 52.6
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 5.5e-84 315.5 277 57.0
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 3.6e-75 286.2 190 69.5
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.8e-74 283.9 330 43.6
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.2e-73 281.2 203 68.5
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.3e-72 277.7 221 62.9
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 5.4e-71 272.3 193 71.0
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.1e-71 271.6 322 47.5
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 2.9e-69 266.5 315 44.4
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 4.7e-67 259.2 204 58.3
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 6.1e-67 258.8 233 56.7
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 9.8e-65 251.5 396 38.9
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.4e-55 221.1 249 47.0
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.2e-54 218.0 304 40.5
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.6e-54 217.6 304 41.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.0e-54 217.2 256 46.5
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.0e-53 213.4 263 45.2
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 5.0e-53 212.6 346 35.5
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.9e-52 210.7 220 50.0
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 5.6e-52 209.1 307 40.4
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.7e-51 206.1 306 39.2
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 9.8e-49 198.4 307 37.8
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 4.1e-47 193.0 318 38.1
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 8.9e-42 175.3 120 69.2
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.4e-41 173.3 115 73.9
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 3.7e-40 169.9 141 60.3
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 2.1e-38 164.1 318 31.8
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.3e-36 156.4 322 32.3
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 8.9e-34 148.7 202 43.1
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 3.4e-33 146.7 123 57.7
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 4.9e-32 142.9 93 73.1
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 5.4e-31 139.4 180 43.9
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 6.6e-29 132.5 142 50.0
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 4.0e-26 123.2 138 48.6
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.2e-24 117.5 125 49.6
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 5.3e-18 96.3 86 58.1
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.9e-15 87.8 56 73.2
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 9.3e-15 85.5 56 71.4
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 2.7e-14 84.0 249 27.3
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 2.3e-13 80.9 244 27.0
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 3.7e-11 73.6 43 76.7
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 6.2e-11 72.8 57 54.4
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.1e-10 72.0 233 25.8
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 2.4e-10 70.9 55 65.5
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.5e-09 68.2 248 27.8
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.5e-09 66.6 58 51.7
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 3.2e-07 60.5 250 24.4
Sopen12g009240 Solanum pennellii HOM05D005748 ORTHO05D007123 4.2e-07 60.1 131 34.4
PGSC0003DMG400020380 Solanum tuberosum HOM05D005748 ORTHO05D007123 4.6e-06 56.6 131 33.6
Nitab4.5_0000160g0130 Nicotiana tabacum HOM05D005748 ORTHO05D007123 7.9e-06 55.8 131 32.1


User provided reference genes

Program Settings