Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 1.7e-132 476.1 258 100.0
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 3.7e-18 96.3 325 29.5
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 3.1e-17 93.2 329 31.3
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 4.1e-17 92.8 266 33.5
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 3.5e-16 89.7 270 34.1
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 5.9e-16 89.0 269 33.8
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 7.7e-16 88.6 326 28.2
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 7.7e-16 88.6 305 30.2
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.3e-15 87.8 316 30.1
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 1.3e-15 87.8 326 29.1
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 1.7e-15 87.4 281 31.7
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.5e-14 84.3 325 26.5
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 1.5e-14 84.3 325 29.8
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.5e-14 83.6 307 29.3
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 1.6e-13 80.9 260 30.4
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 4.7e-13 79.3 328 29.6
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 4.7e-13 79.3 133 40.6
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 1.4e-12 77.8 266 30.5
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 2.3e-12 77.0 316 27.2
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 6.8e-12 75.5 313 26.8
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 8.8e-12 75.1 351 26.8
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 8.8e-12 75.1 316 30.1
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.6e-11 73.6 333 28.5
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 2.6e-11 73.6 114 41.2
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 5.7e-11 72.4 325 27.1
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 5.7e-11 72.4 334 27.2
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 2.2e-10 70.5 318 28.3
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 3.7e-10 69.7 114 36.0
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 8.3e-10 68.6 312 27.2
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.8e-09 67.4 321 27.7
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 1.8e-09 67.4 320 26.9
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 3.1e-09 66.6 323 27.2
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 5.4e-09 65.9 126 37.3
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 7.0e-09 65.5 71 52.1
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 7.0e-09 65.5 71 52.1
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 9.1e-09 65.1 86 45.3
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 9.1e-09 65.1 92 41.3
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 2.7e-08 63.5 116 37.9
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 2.7e-08 63.5 116 37.1
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.0e-07 61.6 75 42.7
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 8.5e-07 58.5 65 46.2
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.1e-06 58.2 83 42.2
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 1.1e-06 58.2 116 35.3
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.5e-06 57.8 110 35.5
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 1.5e-06 57.8 38 73.7
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 2.5e-06 57.0 116 35.3
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 3.2e-06 56.6 339 24.8
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 3.2e-06 56.6 116 34.5


User provided reference genes

Program Settings