Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 9.5e-289 996.1 495 100.0
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 2.5e-212 742.3 485 77.5
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 6.9e-207 724.2 488 74.2
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 4.5e-206 721.5 432 80.8
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.0e-205 720.3 419 81.9
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 5.0e-205 718.0 488 73.4
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 1.1e-204 716.8 493 73.6
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.9e-204 716.1 488 73.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.5e-204 715.7 513 71.7
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 9.4e-204 713.8 446 78.7
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.2e-203 713.4 486 72.8
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.6e-203 713.0 488 73.8
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.7e-203 712.2 487 73.5
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.1e-203 711.1 488 72.5
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 5.2e-202 708.0 462 75.3
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 8.8e-202 707.2 494 73.5
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.5e-201 706.4 479 73.9
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 2.6e-201 705.7 457 76.1
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.3e-200 703.4 419 81.1
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.4e-199 699.9 440 78.0
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 2.4e-199 699.1 486 73.0
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 3.1e-199 698.7 462 75.5
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 9.1e-199 697.2 419 78.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.7e-197 693.0 521 68.5
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.7e-197 693.0 449 74.6
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 2.9e-197 692.2 486 71.8
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.9e-196 689.5 446 76.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.5e-196 689.1 421 78.4
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 5.5e-196 688.0 476 71.2
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 7.2e-196 687.6 461 73.3
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.6e-195 686.4 445 74.4
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.6e-195 685.3 423 78.0
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.7e-195 684.9 477 70.6
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 6.1e-195 684.5 477 70.6
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 2.3e-194 682.6 475 70.3
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 8.8e-194 680.6 464 71.6
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.5e-193 679.9 418 77.5
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.5e-193 679.9 419 77.6
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.0e-193 679.5 419 77.1
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 4.4e-193 678.3 461 72.9
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 4.4e-193 678.3 422 78.4
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 4.4e-193 678.3 439 74.9
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 7.5e-193 677.6 421 77.4
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 7.5e-193 677.6 487 70.8
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.3e-192 676.8 444 73.9
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.7e-192 676.4 429 76.2
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 3.7e-192 675.2 465 71.4
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 3.7e-192 675.2 426 76.8
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 8.2e-192 674.1 474 70.7
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.1e-191 673.7 475 70.7
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.4e-191 672.5 477 69.4
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.4e-191 672.5 443 74.3
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 4.1e-191 671.8 502 66.7
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 5.3e-191 671.4 419 76.4
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.0e-190 669.5 467 70.2
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 5.0e-189 664.8 446 72.4
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.9e-188 662.9 426 74.9
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 3.2e-188 662.1 420 76.2
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 7.2e-188 661.0 419 76.6
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 8.0e-187 657.5 451 72.1
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.8e-186 656.4 445 73.0
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 9.8e-185 650.6 567 61.4
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 2.7e-182 642.5 378 82.0
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.5e-180 636.7 474 68.4
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 7.2e-180 634.4 487 67.8
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 6.1e-179 631.3 379 80.7
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.8e-178 629.8 422 73.2
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 2.0e-177 626.3 478 67.2
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 5.7e-177 624.8 381 76.9
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 2.8e-176 622.5 382 78.5
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 6.3e-176 621.3 382 78.0
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 7.0e-175 617.8 419 72.3
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 1.6e-174 616.7 460 68.9
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 3.5e-174 615.5 382 77.0
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 2.5e-172 609.4 378 75.4
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 9.2e-167 590.9 488 63.1
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.2e-166 590.5 433 70.2
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 8.6e-165 584.3 454 66.1
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 9.5e-164 580.9 335 83.3
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 2.3e-162 576.2 385 72.5
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 2.7e-158 562.8 420 67.4
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.7e-158 562.8 416 68.3
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 7.8e-158 561.2 360 74.4
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.2e-155 553.9 471 60.9
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 4.7e-155 552.0 489 60.9
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.6e-153 546.2 348 75.0
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 7.5e-153 544.7 418 64.4
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 1.7e-152 543.5 439 61.0
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.2e-147 527.3 333 74.8
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 6.0e-142 508.4 316 76.6
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.8e-130 470.3 418 57.9
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.1e-124 451.1 425 54.4
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 9.6e-116 421.4 459 49.0
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 4.5e-105 386.0 246 74.0
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.9e-103 380.6 312 61.5
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 2.5e-95 353.6 312 60.9
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.5e-95 352.4 438 46.1
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 9.4e-95 351.7 312 60.9
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 2.6e-84 317.0 202 72.8
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 9.1e-82 308.5 262 57.3
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 4.2e-79 299.7 225 70.2
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 7.0e-74 282.3 211 69.2
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.8e-67 259.6 179 70.9
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 4.0e-61 240.0 449 39.4
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 4.4e-60 236.5 315 47.6
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 3.6e-54 216.9 165 64.8
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.0e-37 160.2 119 64.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 4.4e-36 156.8 93 79.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 3.5e-33 147.1 84 84.5
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 2.0e-28 131.3 89 71.9
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 5.4e-18 96.7 58 75.9
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.6e-12 77.8 42 90.5
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.3e-08 65.5 99 44.4


User provided reference genes

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