Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 3.7e-232 808.1 506 100.0
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.3e-78 298.1 516 42.1
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.1e-53 215.3 509 37.9
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 2.2e-51 207.6 549 34.8
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 2.9e-51 207.2 507 33.5
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 5.0e-51 206.5 495 40.4
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.1e-49 201.1 488 34.4
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 3.9e-48 196.8 517 37.3
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 3.3e-47 193.7 492 33.5
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 2.6e-44 184.1 472 35.4
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.9e-42 177.9 506 34.8
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.6e-41 174.9 461 33.6
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 2.7e-41 174.1 452 39.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 1.2e-39 168.7 452 33.8
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 9.7e-39 165.6 506 31.8
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 9.7e-39 165.6 472 38.8
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 1.6e-36 158.3 453 37.1
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 2.0e-36 157.9 450 34.4
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.1e-34 152.1 440 31.8
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 5.5e-34 149.8 426 32.6
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 7.2e-34 149.4 433 38.6
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 1.2e-33 148.7 457 32.6
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.2e-33 148.7 443 35.2
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 3.6e-33 147.1 432 34.7
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 6.1e-33 146.4 445 36.9
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 3.0e-32 144.1 471 38.9
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 5.2e-32 143.3 507 35.1
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 8.8e-32 142.5 537 36.3
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 4.4e-31 140.2 464 30.8
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.7e-31 139.8 425 31.8
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.3e-30 138.7 457 44.4
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.3e-30 138.7 409 33.7
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 3.7e-30 137.1 506 29.4
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 6.3e-30 136.3 429 30.8
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.8e-29 134.8 443 34.1
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.1e-29 134.0 441 34.9
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.6e-28 131.7 427 38.2
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.0e-27 129.0 440 30.2
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.9e-26 124.8 421 31.6
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 2.5e-26 124.4 500 29.0
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 4.7e-25 120.2 419 29.4
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 1.8e-24 118.2 414 30.9
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 4.0e-24 117.1 416 36.1
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 5.2e-24 116.7 472 30.1
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 1.5e-23 115.2 426 36.2
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 1.5e-23 115.2 426 36.2
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 2.0e-23 114.8 432 29.2
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 4.4e-23 113.6 408 33.8
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 4.4e-23 113.6 408 33.8
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 7.5e-23 112.8 462 32.0
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 3.7e-22 110.5 441 28.6
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 4.9e-22 110.2 423 31.9
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 8.3e-22 109.4 398 40.5
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 2.4e-21 107.8 431 29.5
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 1.6e-20 105.1 385 32.7
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 7.8e-20 102.8 403 33.5
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-19 102.4 446 28.5
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 1.3e-19 102.1 407 28.7
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 2.3e-19 101.3 420 36.2
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 6.6e-19 99.8 437 28.1
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 1.9e-18 98.2 422 29.4
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 2.5e-18 97.8 449 31.0
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 2.5e-18 97.8 425 30.8
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 7.3e-18 96.3 438 32.0
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.6e-17 95.1 390 27.9
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 2.1e-17 94.7 453 33.8
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 2.1e-17 94.7 453 33.8
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 3.6e-17 94.0 416 28.8
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.6e-17 94.0 394 36.5
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 6.1e-17 93.2 398 34.2
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.4e-16 92.0 396 35.9
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 4.0e-16 90.5 388 32.7
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 6.8e-16 89.7 437 29.5
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.5e-15 88.6 461 27.8
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 3.4e-15 87.4 438 30.4
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 9.8e-15 85.9 414 29.2
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.7e-14 85.1 365 28.8
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 3.7e-14 84.0 403 29.3
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 4.9e-14 83.6 455 27.9
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 4.1e-13 80.5 389 28.3
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 2.0e-12 78.2 437 26.5
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 5.9e-12 76.6 451 26.6
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.3e-11 75.5 358 39.4
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.7e-11 75.1 456 27.0
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 3.0e-11 74.3 404 27.7
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 6.6e-11 73.2 156 39.1
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 6.6e-11 73.2 156 39.1
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 8.6e-11 72.8 438 28.5
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 2.5e-10 71.2 398 36.2
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.5e-10 71.2 465 26.2
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 5.6e-10 70.1 478 25.1
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 5.6e-10 70.1 174 35.6
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 3.6e-09 67.4 170 35.9
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.0e-08 65.9 407 26.8
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.0e-08 65.9 73 46.6
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.1e-08 64.3 155 36.1
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 8.9e-08 62.8 392 29.8
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.2e-07 62.4 163 34.4
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 2.6e-07 61.2 394 36.8
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 9.8e-07 59.3 399 31.6
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 9.8e-07 59.3 415 28.7
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.3e-06 58.9 350 32.3
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.2e-06 58.2 354 28.0


User provided reference genes

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