Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 3.4e-172 608.2 304 100.0
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 9.2e-93 344.4 281 61.6
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.3e-91 340.5 299 60.5
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.0e-91 339.3 273 61.9
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 6.6e-91 338.2 300 60.3
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 8.6e-91 337.8 291 61.5
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 5.6e-90 335.1 291 60.5
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 9.5e-90 334.3 291 60.8
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 1.6e-89 333.6 301 59.8
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 8.0e-89 331.3 284 59.2
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.8e-88 330.1 294 59.5
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 3.1e-88 329.3 277 59.6
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 9.8e-87 324.3 278 57.2
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 2.2e-86 323.2 282 59.6
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 3.7e-86 322.4 309 55.7
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 6.4e-86 321.6 282 57.8
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.4e-85 320.5 284 58.5
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 2.4e-85 319.7 308 56.2
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 9.2e-85 317.8 289 57.8
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 1.6e-84 317.0 275 59.3
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.6e-84 317.0 284 56.0
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.1e-84 316.6 271 58.3
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 2.7e-84 316.2 306 57.2
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.7e-83 313.5 308 54.2
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 2.3e-83 313.2 275 56.4
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 3.0e-83 312.8 289 56.7
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 3.9e-83 312.4 279 57.3
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 5.1e-83 312.0 271 58.3
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 8.6e-83 311.2 275 55.3
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 1.1e-82 310.8 289 55.0
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 4.7e-81 305.4 291 58.4
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 6.2e-81 305.1 286 55.9
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 8.1e-81 304.7 271 59.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.4e-80 303.9 285 52.6
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 2.3e-80 303.1 293 53.9
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 3.1e-80 302.8 281 56.2
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 3.1e-80 302.8 291 56.0
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 5.2e-80 302.0 291 54.0
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 6.8e-80 301.6 289 55.4
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 2.6e-79 299.7 291 55.3
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 7.6e-79 298.1 289 54.7
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 7.6e-79 298.1 289 55.7
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 7.6e-79 298.1 282 55.3
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.2e-78 296.6 275 57.5
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 2.2e-78 296.6 290 54.1
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 7.1e-77 291.6 270 55.9
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 1.2e-76 290.8 270 55.2
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 1.6e-76 290.4 280 57.1
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 4.6e-76 288.9 276 55.1
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 1.3e-75 287.3 273 55.7
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.7e-75 287.0 280 56.8
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.5e-74 283.9 300 53.7
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 4.3e-74 282.3 279 55.9
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 4.0e-72 275.8 306 51.6
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 2.6e-71 273.1 281 52.3
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.4e-71 272.7 261 57.5
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 4.4e-71 272.3 296 47.3
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 4.4e-71 272.3 307 51.5
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 4.2e-69 265.8 291 47.8
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 2.7e-68 263.1 284 54.2
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.9e-62 242.3 219 56.6
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 4.8e-57 225.7 273 47.3
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 3.8e-54 216.1 203 55.2
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 2.8e-49 199.9 162 56.8
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 9.0e-48 194.9 133 66.2
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.8e-35 154.1 117 66.7
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 2.8e-33 146.7 198 43.9
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 1.1e-29 134.8 158 49.4
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 6.7e-27 125.6 310 32.6
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 1.1e-24 118.2 79 65.8
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.3e-22 111.3 316 33.2
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.1e-18 98.2 130 50.0
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 5.2e-11 72.8 44 63.6


User provided reference genes

Program Settings