Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.5e-92 342.8 166 100.0
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.5e-52 209.9 159 59.7
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 4.4e-49 198.4 164 57.3
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 5.8e-49 198.0 163 57.7
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.3e-48 196.8 143 61.5
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 4.9e-48 194.9 157 56.1
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.1e-47 193.7 151 58.3
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.1e-47 193.7 157 58.6
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.4e-47 193.4 151 57.0
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.4e-47 193.4 163 57.7
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 4.2e-47 191.8 157 55.4
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 9.3e-47 190.7 147 57.1
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 9.3e-47 190.7 145 59.3
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 9.3e-47 190.7 145 57.9
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 2.1e-46 189.5 135 62.2
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 3.5e-46 188.7 162 59.3
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 7.8e-46 187.6 145 57.9
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.0e-45 187.2 135 61.5
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.0e-45 187.2 157 55.4
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.3e-45 186.8 157 54.1
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.3e-45 186.8 135 61.5
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.3e-45 186.8 143 58.7
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.7e-45 186.4 153 54.2
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 3.0e-45 185.7 159 52.8
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 3.0e-45 185.7 145 59.3
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 3.0e-45 185.7 147 57.1
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.5e-44 183.3 138 58.0
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 2.5e-44 182.6 138 60.1
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 3.3e-44 182.2 145 57.9
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 3.3e-44 182.2 143 59.4
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 2.8e-43 179.1 160 51.2
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 4.8e-43 178.3 160 52.5
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 8.1e-43 177.6 156 55.1
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.4e-42 176.8 140 57.9
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.4e-42 176.8 153 54.2
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.8e-42 176.4 125 62.4
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.4e-42 176.0 138 58.7
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 3.1e-42 175.6 147 56.5
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 4.0e-42 175.3 140 55.7
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 4.0e-42 175.3 153 52.9
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 6.9e-42 174.5 148 55.4
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.2e-41 173.7 138 58.0
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.2e-41 173.7 150 53.3
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.5e-41 173.3 138 58.0
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.5e-41 173.3 138 58.0
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.5e-41 173.3 148 52.7
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 2.0e-41 172.9 156 53.2
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 2.0e-41 172.9 138 58.0
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.4e-41 172.2 158 51.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 3.4e-41 172.2 141 57.4
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 4.5e-41 171.8 138 57.2
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 4.5e-41 171.8 135 59.3
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 7.6e-41 171.0 149 53.7
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 9.9e-41 170.6 161 51.6
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 9.9e-41 170.6 138 58.0
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 1.3e-40 170.2 135 58.5
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.3e-40 170.2 138 53.6
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 2.9e-40 169.1 150 53.3
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 2.9e-40 169.1 141 55.3
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 3.8e-40 168.7 138 56.5
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 4.9e-40 168.3 159 51.6
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 4.9e-40 168.3 154 52.6
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 6.4e-40 167.9 126 61.9
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 8.4e-40 167.5 141 56.7
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.1e-39 167.2 138 57.2
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.4e-39 166.8 143 55.2
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.4e-39 166.8 145 51.0
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.4e-39 166.0 137 56.2
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 3.5e-38 162.2 156 49.4
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 4.6e-38 161.8 141 54.6
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 6.0e-38 161.4 169 49.1
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.3e-37 160.2 144 53.5
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.3e-37 160.2 139 53.2
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.3e-37 160.2 139 53.2
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.8e-37 159.8 141 53.2
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.8e-37 159.8 161 49.1
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 1.8e-37 159.8 153 51.0
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 2.3e-37 159.5 154 48.7
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.3e-37 159.5 143 52.4
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.9e-37 158.7 154 48.7
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 5.1e-37 158.3 138 52.9
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 5.1e-37 158.3 153 50.3
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 6.7e-37 157.9 138 52.9
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 2.5e-36 156.0 130 53.8
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 2.5e-36 156.0 137 51.8
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 7.4e-36 154.5 128 53.9
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 4.8e-35 151.8 179 46.4
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 4.8e-35 151.8 164 47.0
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.4e-34 149.4 123 54.5
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.5e-33 146.7 138 49.3
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 2.0e-33 146.4 105 61.0
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.0e-32 144.1 140 49.3
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.7e-32 143.3 161 47.8
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 8.4e-32 141.0 147 47.6
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.1e-31 140.6 141 49.6
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.2e-30 137.1 109 56.9
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 6.7e-29 131.3 116 55.2
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.6e-27 126.7 161 40.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 4.8e-27 125.2 163 42.3
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 4.0e-26 122.1 144 39.6
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 1.5e-25 120.2 106 51.9
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 2.6e-25 119.4 137 43.1
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.0e-24 117.5 93 59.1
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 6.5e-24 114.8 128 37.5
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 1.1e-20 104.0 69 69.6
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 8.2e-19 97.8 81 53.1
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 9.0e-18 94.4 63 61.9
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 1.5e-17 93.6 138 37.7
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 5.9e-17 91.7 65 61.5
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.7e-16 90.1 137 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 1.1e-15 87.4 105 41.9
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 4.6e-14 82.0 141 32.6
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 5.3e-10 68.6 59 49.2
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 4.5e-09 65.5 112 33.9
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.0e-08 64.3 85 38.8


User provided reference genes

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