Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 9.6e-43 176.4 88 100.0
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 4.6e-37 157.5 87 88.5
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 6.0e-37 157.1 87 89.7
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 7.9e-37 156.8 85 89.4
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 1.8e-36 155.6 85 88.2
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 3.0e-36 154.8 88 86.4
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 5.1e-36 154.1 87 86.2
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 8.7e-36 153.3 85 87.1
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 1.5e-35 152.5 87 85.1
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 1.9e-35 152.1 87 87.4
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 1.9e-35 152.1 87 81.6
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 2.5e-35 151.8 86 84.9
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 2.5e-35 151.8 87 83.9
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 3.3e-35 151.4 87 81.6
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 3.3e-35 151.4 87 83.9
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 3.3e-35 151.4 87 86.2
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 3.3e-35 151.4 87 82.8
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 4.3e-35 151.0 86 84.9
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 4.3e-35 151.0 86 84.9
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 4.3e-35 151.0 86 84.9
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 4.3e-35 151.0 86 84.9
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 5.6e-35 150.6 86 84.9
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 5.6e-35 150.6 87 86.2
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 5.6e-35 150.6 86 84.9
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 7.4e-35 150.2 85 85.9
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 9.6e-35 149.8 87 87.4
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 9.6e-35 149.8 87 85.1
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 9.6e-35 149.8 85 88.2
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 9.6e-35 149.8 84 85.7
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 9.6e-35 149.8 84 85.7
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 1.3e-34 149.4 86 87.2
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 1.6e-34 149.1 87 86.2
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 1.6e-34 149.1 85 85.9
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 2.1e-34 148.7 83 88.0
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 2.1e-34 148.7 85 83.5
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 2.1e-34 148.7 88 83.0
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.8e-34 148.3 87 83.9
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 2.8e-34 148.3 88 80.7
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 3.7e-34 147.9 86 87.2
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 3.7e-34 147.9 82 86.6
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 3.7e-34 147.9 84 85.7
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 3.7e-34 147.9 87 85.1
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 4.8e-34 147.5 85 85.9
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 4.8e-34 147.5 87 80.5
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 4.8e-34 147.5 85 83.5
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 4.8e-34 147.5 80 90.0
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 8.1e-34 146.7 87 80.5
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 8.1e-34 146.7 88 84.1
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 8.1e-34 146.7 82 86.6
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 1.1e-33 146.4 84 83.3
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 1.1e-33 146.4 85 83.5
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.1e-33 146.4 86 83.7
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 1.4e-33 146.0 88 80.7
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 1.4e-33 146.0 87 81.6
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 1.4e-33 146.0 87 81.6
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 1.4e-33 146.0 85 83.5
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.4e-33 146.0 88 80.7
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 1.8e-33 145.6 88 85.2
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 1.8e-33 145.6 82 85.4
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 2.4e-33 145.2 82 85.4
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 2.4e-33 145.2 85 80.0
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 2.4e-33 145.2 88 81.8
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 2.4e-33 145.2 86 83.7
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 2.4e-33 145.2 87 82.8
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 2.4e-33 145.2 86 82.6
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 2.4e-33 145.2 88 85.2
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 2.4e-33 145.2 88 85.2
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 2.4e-33 145.2 88 85.2
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 3.1e-33 144.8 80 86.2
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 4.0e-33 144.4 86 83.7
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 4.0e-33 144.4 88 81.8
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 5.3e-33 144.1 82 84.1
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 5.3e-33 144.1 83 84.3
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 5.3e-33 144.1 87 82.8
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 1.5e-32 142.5 84 82.1
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 1.5e-32 142.5 80 86.2
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 1.5e-32 142.5 82 84.1
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 2.0e-32 142.1 83 80.7
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 2.0e-32 142.1 83 80.7
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 2.0e-32 142.1 83 80.7
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 2.0e-32 142.1 88 80.7
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 2.0e-32 142.1 78 88.5
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 2.0e-32 142.1 78 88.5
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 2.6e-32 141.7 84 81.0
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 3.4e-32 141.4 82 81.7
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 7.6e-32 140.2 91 75.8
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 7.6e-32 140.2 82 82.9
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 9.9e-32 139.8 82 82.9
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 2.9e-31 138.3 82 79.3
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 2.9e-31 138.3 82 79.3
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 2.9e-31 138.3 80 81.2
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 2.9e-31 138.3 103 70.9
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 2.9e-31 138.3 80 81.2
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 3.8e-31 137.9 84 81.0
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 3.8e-31 137.9 80 80.0
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 4.9e-31 137.5 87 74.7
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 4.9e-31 137.5 80 80.0
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 4.9e-31 137.5 82 78.0
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 4.9e-31 137.5 80 85.0
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 6.4e-31 137.1 85 80.0
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 6.4e-31 137.1 78 83.3
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 1.4e-30 136.0 73 89.0
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 1.4e-30 136.0 87 77.0
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 4.2e-30 134.4 78 82.1
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 4.2e-30 134.4 95 71.6
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 7.1e-30 133.7 78 82.1
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 9.3e-30 133.3 115 62.6
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 6.0e-29 130.6 99 68.7
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 7.4e-27 123.6 86 72.1
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 8.2e-26 120.2 79 72.2
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 1.1e-25 119.8 81 69.1
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 9.0e-25 116.7 68 85.3
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.2e-24 116.3 79 68.4
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 4.5e-24 114.4 131 50.4
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 4.5e-24 114.4 131 50.4
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 1.7e-23 112.5 62 88.7
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 2.1e-21 105.5 57 87.7
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.5e-16 87.8 55 78.2
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.5e-16 87.8 55 78.2
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 4.5e-16 87.8 55 78.2
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 1.0e-15 86.7 85 51.8
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 3.0e-12 75.1 49 75.5
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 1.8e-09 65.9 39 82.1


User provided reference genes

Program Settings