Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2288 Punica granatum HOM05D013472 ORTHO05D015108 4.0e-287 990.7 497 100.0
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 1.3e-253 879.4 497 89.3
PGR083G1646 Punica granatum HOM05D013472 ORTHO05D015108 1.7e-245 852.4 497 87.5
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 7.4e-233 810.4 497 81.7
PGR142G1294 Punica granatum HOM05D013472 ORTHO05D015108 2.5e-228 795.4 497 79.9
PGR031G1522 Punica granatum HOM05D013472 ORTHO05D015108 1.2e-193 680.2 490 68.4
PGR142G0060 Punica granatum HOM05D013472 ORTHO05D015108 1.1e-191 673.7 405 80.7
PGR031G1298 Punica granatum HOM05D013472 ORTHO05D015108 3.0e-181 639.0 497 67.6
PGR042G3387 Punica granatum HOM05D013472 ORTHO05D015108 1.1e-148 530.8 295 90.8
PGR031G0529 Punica granatum HOM05D013472 ORTHO05D015108 3.3e-39 167.2 140 65.0
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 2.1e-22 111.3 359 25.9
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 3.4e-20 104.0 326 27.3
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 9.9e-20 102.4 72 62.5
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 2.2e-19 101.3 345 27.0
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 2.9e-19 100.9 333 26.7
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 6.0e-17 93.2 350 25.1
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.3e-16 92.0 454 23.8
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 2.3e-16 91.3 345 25.5
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 3.3e-15 87.4 329 24.0
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 7.4e-15 86.3 289 27.7
TWI79G0344 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 3.1e-13 80.9 194 27.8
Gorai.001G080800 Gossypium raimondii HOM05D002881 ORTHO05D002983 4.0e-13 80.5 283 24.4
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 1.2e-12 79.0 255 27.1
Gohir.D13G093150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 2.6e-12 77.8 292 25.7
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 3.8e-11 73.9 213 27.2
PGR042G1687 Punica granatum HOM05D000047 ORTHO05D015108 1.4e-10 72.0 57 52.6
Thecc.02G286200 Theobroma cacao HOM05D002881 ORTHO05D002983 3.2e-10 70.9 303 24.4
Medtr3g018710 Medicago truncatula HOM05D002881 ORTHO05D002983 2.7e-09 67.8 325 23.4
Medtr4g054440 Medicago truncatula HOM05D002881 ORTHO05D002983 2.7e-09 67.8 324 23.5
Duzib235G1144 Durio zibethinus HOM05D002881 ORTHO05D002983 3.5e-09 67.4 352 21.9
Medtr3g051650 Medicago truncatula HOM05D002881 ORTHO05D002983 7.9e-09 66.2 320 20.9
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-08 65.5 201 26.4
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 1.3e-08 65.5 305 24.3
MELO3C025327.2 Cucumis melo HOM05D002881 ORTHO05D002983 1.8e-08 65.1 237 25.3
Medtr3g013580 Medicago truncatula HOM05D002881 ORTHO05D002983 1.8e-08 65.1 312 21.8
Medtr7g006680 Medicago truncatula HOM05D002881 ORTHO05D002983 2.3e-08 64.7 320 20.9
Medtr7g046110 Medicago truncatula HOM05D002881 ORTHO05D002983 2.3e-08 64.7 320 20.9
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-08 64.3 332 23.2
Medtr8g052425 Medicago truncatula HOM05D002881 ORTHO05D002983 3.9e-08 63.9 279 24.0
Gorai.010G160500 Gossypium raimondii HOM05D002881 ORTHO05D002983 5.1e-08 63.5 204 25.5
Medtr5g080530 Medicago truncatula HOM05D002881 ORTHO05D002983 5.1e-08 63.5 320 20.6
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 8.7e-08 62.8 291 23.7
Medtr4g031710 Medicago truncatula HOM05D002881 ORTHO05D002983 1.9e-07 61.6 324 22.8
Medtr3g091160 Medicago truncatula HOM05D002881 ORTHO05D002983 2.5e-07 61.2 320 20.6
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 3.3e-07 60.8 305 23.3
PGR102G1115 Punica granatum HOM05D000047 ORTHO05D007790 4.3e-07 60.5 63 58.7
vmacro23372 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 7.4e-07 59.7 297 24.9
PGR142G3925 Punica granatum HOM05D000047 ORTHO05D000589 9.7e-07 59.3 38 84.2
PGR142G3921 Punica granatum HOM05D000047 ORTHO05D015108 2.2e-06 58.2 76 47.4
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 2.2e-06 58.2 335 22.7
vmacro07191 Vaccinium macrocarpon HOM05D015182 ORTHO05D010968 3.7e-06 57.4 292 25.0


User provided reference genes

Program Settings