Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.5e-115 419.5 209 100.0
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 5.3e-39 165.2 149 65.1
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 3.4e-38 162.5 201 52.2
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 4.4e-38 162.2 183 55.7
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 8.4e-37 157.9 140 62.1
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 8.4e-37 157.9 177 55.4
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 5.4e-36 155.2 176 54.0
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 5.4e-36 155.2 169 55.0
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 2.1e-35 153.3 140 60.0
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 2.7e-35 152.9 140 61.4
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 3.5e-35 152.5 142 62.7
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 4.6e-35 152.1 140 62.1
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 7.8e-35 151.4 140 60.0
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 5.1e-34 148.7 177 52.0
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 8.7e-34 147.9 151 57.6
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.5e-33 147.1 177 53.1
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.9e-33 146.7 147 58.5
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 3.3e-33 146.0 158 57.0
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 5.6e-33 145.2 140 57.1
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 5.6e-33 145.2 121 66.1
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 7.3e-33 144.8 144 61.1
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 9.6e-33 144.4 156 54.5
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 9.6e-33 144.4 136 58.8
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 9.6e-33 144.4 135 60.0
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.3e-32 144.1 149 58.4
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.3e-32 144.1 143 55.9
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.6e-32 143.7 149 57.7
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.1e-32 143.3 171 53.8
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.1e-32 143.3 143 56.6
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 2.1e-32 143.3 158 55.1
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.6e-32 142.5 143 55.9
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 8.1e-32 141.4 132 59.1
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.1e-31 141.0 217 46.1
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 2.4e-31 139.8 143 55.2
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.1e-31 139.4 143 56.6
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 4.0e-31 139.0 136 57.4
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 4.0e-31 139.0 140 56.4
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 4.0e-31 139.0 147 57.8
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 5.3e-31 138.7 155 55.5
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 5.3e-31 138.7 140 56.4
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 9.0e-31 137.9 188 45.7
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 4.5e-30 135.6 140 55.0
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 5.8e-30 135.2 115 62.6
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 7.6e-30 134.8 159 50.9
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 1.7e-29 133.7 134 55.2
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 1.7e-29 133.7 148 54.7
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 2.2e-29 133.3 134 54.5
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 2.2e-29 133.3 139 56.1
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.9e-29 132.9 150 52.7
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 3.8e-29 132.5 153 51.6
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.9e-28 130.2 189 46.0
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 4.2e-28 129.0 169 51.5
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.0e-26 124.4 149 51.0
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.0e-26 124.4 206 43.2
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.8e-26 123.6 137 48.9
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.1e-25 120.9 141 51.8
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 1.9e-25 120.2 138 54.3
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 1.9e-25 120.2 134 53.7
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 4.3e-25 119.0 138 53.6
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 4.3e-25 119.0 138 53.6
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 5.6e-25 118.6 138 53.6
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 5.6e-25 118.6 138 53.6
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 7.4e-25 118.2 135 54.8
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 1.3e-24 117.5 183 41.0
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.6e-24 117.1 110 59.1
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 1.6e-24 117.1 110 60.0
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 3.7e-24 115.9 140 52.9
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 4.8e-24 115.5 167 48.5
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 8.1e-24 114.8 150 47.3
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 8.1e-24 114.8 160 46.9
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.8e-23 113.6 138 53.6
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.8e-23 113.6 146 48.6
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 1.8e-23 113.6 104 59.6
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 4.0e-23 112.5 141 47.5
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 2.0e-22 110.2 110 57.3
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 4.5e-22 109.0 118 53.4
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 7.6e-22 108.2 132 46.2
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 4.9e-21 105.5 104 52.9
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.6e-19 100.5 113 48.7
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 2.1e-19 100.1 101 49.5
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.0e-18 97.8 98 57.1
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 5.1e-18 95.5 109 50.5
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.1e-17 94.4 175 37.1
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 3.3e-17 92.8 122 52.5
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 5.3e-15 85.5 106 43.4
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.2e-14 84.3 106 44.3
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 2.7e-11 73.2 126 35.7
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.5e-09 67.4 75 57.3
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 2.2e-08 63.5 92 50.0
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.8e-08 62.4 65 60.0
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.8e-08 62.4 65 60.0
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.1e-07 61.2 66 57.6
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 9.0e-07 58.2 64 53.1
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 2.6e-06 56.6 98 42.9
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.6e-06 56.6 41 70.7


User provided reference genes

Program Settings