Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 7.3e-195 683.7 349 100.0
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.2e-107 394.0 347 64.3
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 8.1e-101 371.3 348 57.5
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 2.3e-100 369.8 348 58.3
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 2.3e-100 369.8 334 61.1
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 4.0e-100 369.0 340 60.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.7e-98 363.6 332 59.3
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.9e-97 360.1 339 58.1
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.2e-97 359.4 339 58.1
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.2e-97 359.4 342 57.9
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.6e-96 357.1 330 60.0
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 2.1e-96 356.7 340 57.9
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 4.6e-96 355.5 330 60.0
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 7.8e-96 354.8 336 58.0
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.7e-95 353.6 339 57.2
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 2.5e-94 349.7 338 57.1
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 1.2e-93 347.4 345 55.9
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.6e-93 347.1 332 56.6
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.2e-93 345.1 341 57.8
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 6.2e-93 345.1 338 55.9
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 6.2e-93 345.1 347 57.3
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.3e-92 343.2 330 56.4
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 6.8e-92 341.7 336 57.7
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 8.9e-92 341.3 339 55.8
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-91 340.9 341 56.9
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.5e-91 340.5 336 58.6
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 2.6e-91 339.7 344 57.0
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 4.4e-91 339.0 341 57.2
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 4.4e-91 339.0 334 56.0
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 2.9e-90 336.3 340 55.9
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 6.4e-90 335.1 344 52.0
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.4e-90 335.1 341 56.6
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 6.4e-90 335.1 326 57.7
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 8.4e-90 334.7 341 56.6
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 8.4e-90 334.7 334 57.8
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.4e-89 334.0 332 58.7
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.9e-89 333.6 326 55.5
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.4e-89 333.2 333 52.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 4.1e-89 332.4 333 53.5
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 4.1e-89 332.4 333 53.5
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 4.1e-89 332.4 341 55.1
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 5.4e-89 332.0 333 52.9
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 5.4e-89 332.0 327 57.8
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.4e-89 332.0 354 53.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 7.1e-89 331.6 331 56.5
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 7.1e-89 331.6 334 56.9
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.6e-88 330.5 333 52.9
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.6e-88 330.5 450 44.2
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.1e-88 330.1 329 57.1
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 6.0e-88 328.6 338 54.1
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 7.8e-88 328.2 345 52.5
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 7.8e-88 328.2 343 52.5
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 7.8e-88 328.2 343 52.5
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.0e-87 327.8 347 54.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.3e-87 327.4 341 51.0
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.7e-87 327.0 344 51.7
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.7e-87 327.0 333 52.3
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 5.1e-87 325.5 347 54.2
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.9e-86 323.6 338 53.6
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.6e-85 320.5 330 51.2
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 8.1e-85 318.2 349 53.9
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 3.1e-84 316.2 329 54.4
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 4.0e-84 315.8 350 52.3
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.2e-83 314.3 333 54.4
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 3.4e-83 312.8 329 55.6
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 7.6e-83 311.6 335 54.0
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 7.6e-83 311.6 346 52.9
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 7.6e-83 311.6 331 53.5
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.7e-82 310.5 341 52.8
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 2.9e-82 309.7 334 53.6
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 3.8e-82 309.3 348 52.0
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 3.8e-82 309.3 328 54.0
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 8.4e-82 308.1 346 50.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.2e-81 306.2 334 52.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.2e-81 305.8 350 52.9
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 7.1e-81 305.1 334 52.1
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.6e-80 303.9 340 52.4
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.1e-80 303.5 326 54.3
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 3.5e-80 302.8 331 50.5
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.5e-78 297.4 338 51.8
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 4.3e-78 295.8 329 54.7
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 4.3e-78 295.8 333 52.9
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 5.6e-78 295.4 339 53.1
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.8e-77 292.4 343 53.6
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.4e-76 290.0 373 49.1
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 2.4e-73 280.0 337 48.4
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 3.9e-71 272.7 289 51.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 1.6e-69 267.3 335 50.1
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.7e-66 257.3 253 55.3
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 4.2e-65 252.7 330 45.8
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 4.6e-64 249.2 258 55.4
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 3.3e-62 243.0 259 53.7
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.1e-60 236.5 379 40.9
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 6.5e-50 202.2 374 35.8
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 2.5e-49 200.3 213 54.0
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 3.2e-49 199.9 431 36.2
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 7.2e-49 198.7 239 52.7
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 5.9e-43 179.1 364 35.2
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 7.2e-41 172.2 206 52.4
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-38 164.9 294 39.1
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.8e-36 157.5 139 59.7
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 5.9e-27 125.9 450 26.2
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.7e-26 124.4 87 73.6
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 6.5e-26 122.5 124 56.5
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 7.2e-25 119.0 219 37.9
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 4.0e-23 113.2 115 53.9
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.3e-21 108.2 265 32.5
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.4e-20 104.8 70 74.3
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 8.5e-18 95.5 55 78.2
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.5e-17 94.7 178 36.5
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 4.2e-17 93.2 114 49.1
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.2e-16 91.7 54 77.8
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.2e-14 85.1 201 28.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.4e-14 83.6 200 29.0
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-12 78.6 42 81.0
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 3.1e-12 77.0 45 73.3
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.0e-12 75.9 51 66.7
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.6e-11 74.7 51 62.7
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 5.9e-11 72.8 44 72.7
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 3.6e-08 63.5 43 65.1


User provided reference genes

Program Settings