Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2113 Punica granatum HOM05D005542 ORTHO05D006708 3.1e-130 468.4 226 100.0
Cfa017517 Carpinus fangiana HOM05D005542 ORTHO05D006708 4.4e-92 341.7 221 74.7
Potri.006G130700 Populus trichocarpa HOM05D005542 ORTHO05D006708 3.7e-91 338.6 226 70.4
Haze_20632 Corylus avellana HOM05D005542 ORTHO05D006708 4.9e-91 338.2 221 74.7
Manes.08G004100 Manihot esculenta HOM05D005542 ORTHO05D006708 4.1e-90 335.1 223 71.7
THA.LOC104823241 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 2.7e-89 332.4 223 71.7
Gorai.001G248000 Gossypium raimondii HOM05D005542 ORTHO05D006708 2.3e-88 329.3 218 71.6
MD12G1123000 Malus domestica HOM05D005542 ORTHO05D006708 5.1e-88 328.2 223 70.0
Sabra06G0102700 Salix brachista HOM05D005542 ORTHO05D006708 8.6e-88 327.4 226 67.7
Sed0012482 Sechium edule HOM05D005542 ORTHO05D006708 3.3e-87 325.5 221 71.0
Cfa017518 Carpinus fangiana HOM05D005542 ORTHO05D006708 9.6e-87 323.9 221 71.5
Prupe.6G240200 Prunus persica HOM05D005542 ORTHO05D006708 1.2e-86 323.6 226 68.6
CANSAT80G0049 Cannabis sativa HOM05D005542 ORTHO05D006708 1.6e-86 323.2 217 71.4
BolC9t60101H Brassica oleracea HOM05D005542 ORTHO05D006708 8.1e-86 320.9 219 69.9
FAN02G2564 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.1e-85 320.5 220 69.1
BcaC06g32035 Brassica carinata HOM05D005542 ORTHO05D006708 1.8e-85 319.7 218 70.2
FAN05G5506 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.8e-85 319.7 220 68.6
RcHm_v2.0_Chr3g0468971 Rosa chinensis HOM05D005542 ORTHO05D006708 1.8e-85 319.7 223 68.6
C09p73660 Brassica napus HOM05D005542 ORTHO05D006708 2.4e-85 319.3 219 69.9
BraA02t04743Z Brassica rapa HOM05D005542 ORTHO05D006708 2.4e-85 319.3 220 69.5
Sabra16G0093000 Salix brachista HOM05D005542 ORTHO05D006708 3.1e-85 318.9 221 68.3
BcaC03g13032 Brassica carinata HOM05D005542 ORTHO05D006708 4.0e-85 318.5 220 69.1
Aqoxy4G03224 Aquilegia oxysepala HOM05D005542 ORTHO05D006708 5.2e-85 318.2 215 67.9
C02p00780 Brassica napus HOM05D005542 ORTHO05D006708 5.2e-85 318.2 220 69.1
BolC2t06076H Brassica oleracea HOM05D005542 ORTHO05D006708 5.2e-85 318.2 220 69.1
FAN14G1906 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.2e-84 317.0 217 68.7
Sed0011219 Sechium edule HOM05D005542 ORTHO05D006708 1.2e-84 317.0 218 70.2
BcaB05g21852 Brassica carinata HOM05D005542 ORTHO05D006708 1.5e-84 316.6 220 69.1
TAR623G0063 Trochodendron aralioides HOM05D005542 ORTHO05D006708 2.6e-84 315.8 218 69.3
AL6G12370 Arabidopsis lyrata HOM05D005542 ORTHO05D006708 3.4e-84 315.5 220 69.1
FvH4_6g15490 Fragaria vesca HOM05D005542 ORTHO05D006708 3.4e-84 315.5 217 68.7
FAN09G2765 Fragaria x ananassa HOM05D005542 ORTHO05D006708 3.4e-84 315.5 217 68.7
Dinv37264 Davidia involucrata HOM05D005542 ORTHO05D006708 4.9e-83 311.6 223 67.3
Potri.016G086700 Populus trichocarpa HOM05D005542 ORTHO05D006708 8.4e-83 310.8 221 67.0
AT5G03080 Arabidopsis thaliana HOM05D005542 ORTHO05D006708 1.1e-82 310.5 220 68.2
MSTRG.10302 Avicennia marina HOM05D005542 ORTHO05D006708 1.1e-82 310.5 224 67.9
MBI15_g16380_MAGBIO Magnolia biondii HOM05D005542 ORTHO05D006708 1.1e-82 310.5 221 67.4
TAR369G0130 Trochodendron aralioides HOM05D005542 ORTHO05D006708 1.9e-82 309.7 225 65.3
Carub.0006s0187 Capsella rubella HOM05D005542 ORTHO05D006708 2.4e-82 309.3 220 68.2
HanXRQChr13g0399571 Helianthus annuus HOM05D005542 ORTHO05D006708 4.2e-82 308.5 220 67.3
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 4.2e-82 308.5 223 65.5
Manes.08G004101 Manihot esculenta HOM05D005542 ORTHO05D006708 5.4e-82 308.1 223 68.2
Manes.08G004113 Manihot esculenta HOM05D005542 ORTHO05D006708 5.4e-82 308.1 223 68.2
Manes.08G004123 Manihot esculenta HOM05D005542 ORTHO05D006708 5.4e-82 308.1 223 68.2
Manes.08G004124 Manihot esculenta HOM05D005542 ORTHO05D006708 5.4e-82 308.1 223 68.2
Manes.08G004129 Manihot esculenta HOM05D005542 ORTHO05D006708 5.4e-82 308.1 223 68.2
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 9.3e-82 307.4 217 70.5
CARHR210250 Cardamine hirsuta HOM05D005542 ORTHO05D006708 1.2e-81 307.0 221 67.9
Dinv35725 Davidia involucrata HOM05D005542 ORTHO05D006708 1.2e-81 307.0 226 66.4
Thhalv10014320m.g Eutrema salsugineum HOM05D005542 ORTHO05D006708 1.6e-81 306.6 217 68.2
TPR.G30255 Trifolium pratense HOM05D005542 ORTHO05D006708 1.6e-81 306.6 220 65.0
Migut.L01666 Erythranthe guttata HOM05D005542 ORTHO05D006708 2.1e-81 306.2 219 67.1
Cc06_g03660 Coffea canephora HOM05D005542 ORTHO05D006708 7.8e-81 304.3 222 66.7
Ah.01g009250 Amaranthus hybridus HOM05D005542 ORTHO05D006708 1.3e-80 303.5 218 66.5
CAN.G1676.11 Capsicum annuum HOM05D005542 ORTHO05D006708 1.5e-79 300.1 218 67.0
Lj3P980T19 Lonicera japonica HOM05D005542 ORTHO05D006708 4.3e-79 298.5 223 63.7
THA.LOC104816326 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 4.3e-79 298.5 217 65.9
AUR62040036 Chenopodium quinoa HOM05D005542 ORTHO05D006708 1.3e-78 297.0 221 65.2
SGA_v2.0_scaffold94G28671 Striga asiatica HOM05D005542 ORTHO05D006708 1.3e-78 297.0 224 64.3
Lsat_1_v5_gn_1_54060 Lactuca sativa HOM05D005542 ORTHO05D006708 1.6e-78 296.6 220 64.5
Psat6g070280 Pisum sativum HOM05D005542 ORTHO05D006708 2.1e-78 296.2 221 63.3
AUR62042543 Chenopodium quinoa HOM05D005542 ORTHO05D006708 2.8e-78 295.8 221 64.7
Zm00001eb013250 Zea mays HOM05D005542 ORTHO05D006708 6.2e-78 294.7 218 66.1
VMungo1309G1614 Vigna mungo HOM05D005542 ORTHO05D006708 8.1e-78 294.3 222 65.8
Lsat_1_v5_gn_6_30080 Lactuca sativa HOM05D005542 ORTHO05D006708 2.4e-77 292.7 218 66.5
HPP92_012051 Vanilla planifolia HOM05D005542 ORTHO05D006708 2.4e-77 292.7 221 64.7
Cpa.g.sc174.15 Carica papaya HOM05D005542 ORTHO05D006708 9.0e-77 290.8 223 64.1
BcaNung06917 Brassica carinata HOM05D005542 ORTHO05D006708 2.0e-76 289.7 218 65.1
MSTRG.19142 Avicennia marina HOM05D005542 ORTHO05D006708 7.6e-76 287.7 222 62.6
Os03g0288700 Oryza sativa ssp. japonica HOM05D005542 ORTHO05D006708 1.7e-75 286.6 218 65.1
Lj5g0010386 Lotus japonicus HOM05D005542 ORTHO05D006708 3.8e-75 285.4 218 63.3
Eucgr.K03216 Eucalyptus grandis HOM05D005542 ORTHO05D006708 4.2e-74 282.0 225 63.1
Medtr1g066770 Medicago truncatula HOM05D005542 ORTHO05D006708 1.2e-73 280.4 223 61.4
SalBow3G3282 Salvia bowleyana HOM05D005542 ORTHO05D006708 4.6e-73 278.5 213 64.8
SalBow3G3389 Salvia bowleyana HOM05D005542 ORTHO05D006708 4.6e-73 278.5 213 64.8
CiPaw.09G179200 Carya illinoinensis HOM05D005542 ORTHO05D006708 6.0e-73 278.1 221 62.4
Gohir.D13G095800 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.7e-72 276.6 218 61.5
Thecc.05G055500 Theobroma cacao HOM05D005542 ORTHO05D006708 2.3e-72 276.2 218 61.9
Ciclev10012685m.g Citrus clementina HOM05D005542 ORTHO05D006708 3.0e-72 275.8 219 63.0
Duzib128G1803 Durio zibethinus HOM05D005542 ORTHO05D006708 3.0e-72 275.8 218 61.9
QL07p045114 Quercus lobata HOM05D005542 ORTHO05D006708 5.1e-72 275.0 223 61.4
CSS0028203 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 6.6e-72 274.6 225 60.9
CSS0011727 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 1.1e-71 273.9 225 60.9
Aa31LG1G21960 Aethionema arabicum HOM05D005542 ORTHO05D006708 3.3e-71 272.3 220 61.8
A10p32790 Brassica napus HOM05D005542 ORTHO05D006708 5.6e-71 271.6 219 61.6
BraA10t45313Z Brassica rapa HOM05D005542 ORTHO05D006708 5.6e-71 271.6 219 61.6
Gohir.A13G082150 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.6e-70 270.0 218 60.6
Nn2g10693 Nelumbo nucifera HOM05D005542 ORTHO05D006708 2.8e-70 269.2 227 58.6
MELO3C014679.2 Cucumis melo HOM05D005542 ORTHO05D006708 3.6e-70 268.9 221 60.6
CsaV3_4G023360 Cucumis sativus L. HOM05D005542 ORTHO05D006708 3.6e-70 268.9 221 60.2
MD04G1105500 Malus domestica HOM05D005542 ORTHO05D006708 3.6e-70 268.9 221 60.6
unitig_26.g9217 Utricularia gibba HOM05D005542 ORTHO05D006708 3.6e-70 268.9 206 63.6
DCAR_009281 Daucus carota HOM05D005542 ORTHO05D006708 4.8e-70 268.5 220 58.6
Sp6g39610 Schrenkiella parvula HOM05D005542 ORTHO05D006708 4.8e-70 268.5 219 60.7
ClCG02G023990 Citrullus lanatus HOM05D005542 ORTHO05D006708 8.1e-70 267.7 218 60.6
PSO063G7551 Papaver somniferum HOM05D005542 ORTHO05D006708 1.1e-69 267.3 220 59.5
PSO339G3338 Papaver somniferum HOM05D005542 ORTHO05D006708 1.1e-69 267.3 220 59.5
ATR0314G039 Amborella trichopoda HOM05D005542 ORTHO05D006708 1.4e-69 266.9 218 59.6
Sc02g0001930 Simmondsia chinensis HOM05D005542 ORTHO05D006708 3.1e-69 265.8 223 59.6
Oeu060090.1 Olea europaea HOM05D005542 ORTHO05D006708 4.0e-69 265.4 220 60.0
Nn2g10694 Nelumbo nucifera HOM05D005542 ORTHO05D006708 9.0e-69 264.2 222 59.0
SHI12539 Sapria himalayana HOM05D005542 ORTHO05D006708 1.5e-68 263.5 223 60.5
SEGI_14044 Sequoiadendron giganteum HOM05D005542 ORTHO05D006708 1.7e-67 260.0 215 58.1
HanXRQChr13g0399561 Helianthus annuus HOM05D005542 ORTHO05D006708 4.9e-67 258.5 218 59.6
Phvul.007G164600 Phaseolus vulgaris HOM05D005542 ORTHO05D006708 4.9e-67 258.5 222 58.1
Actinidia19704 Actinidia chinensis HOM05D005542 ORTHO05D006708 8.4e-67 257.7 197 64.0
Sopen09g002330 Solanum pennellii HOM05D005542 ORTHO05D006708 4.6e-65 251.9 218 57.8
Glyma.13G137800 Glycine max HOM05D005542 ORTHO05D006708 7.9e-65 251.1 220 56.8
Mapoly0060s0060 Marchantia polymorpha HOM05D005542 ORTHO05D006708 1.0e-64 250.8 213 55.4
Glyma.10G050300 Glycine max HOM05D005542 ORTHO05D006708 6.7e-64 248.1 218 57.3
Nitab4.5_0000669g0160 Nicotiana tabacum HOM05D005542 ORTHO05D006708 2.5e-63 246.1 221 56.1
CiPaw.10G136900 Carya illinoinensis HOM05D005542 ORTHO05D006708 5.6e-63 245.0 215 56.3
COL.COLO4_27064 Corchorus olitorius HOM05D005542 ORTHO05D006708 5.6e-63 245.0 170 69.4
Solyc09g007450.3 Solanum lycopersicum HOM05D005542 ORTHO05D006708 1.3e-62 243.8 218 56.4
HanXRQChr11g0350001 Helianthus annuus HOM05D005542 ORTHO05D006708 1.6e-62 243.4 220 55.5
SMO367G0756 Selaginella moellendorffii HOM05D005542 ORTHO05D006708 2.1e-62 243.0 214 56.1
PGR004G0770 Punica granatum HOM05D005542 ORTHO05D006708 1.8e-61 240.0 218 56.9
COL.COLO4_27065 Corchorus olitorius HOM05D005542 ORTHO05D006708 5.8e-60 235.0 171 67.3
Pp3c16_13170 Physcomitrium patens HOM05D005542 ORTHO05D006708 7.6e-60 234.6 214 49.5
Lalb_Chr21g0314711 Lupinus albus HOM05D005542 ORTHO05D006708 1.0e-59 234.2 222 53.2
Pp3c5_750 Physcomitrium patens HOM05D005542 ORTHO05D006708 1.4e-58 230.3 220 47.7
Oeu029419.1 Olea europaea HOM05D005542 ORTHO05D006708 3.5e-57 225.7 172 65.1
CDE02G2407 Ceratophyllum demersum HOM05D000280 ORTHO05D000632 8.7e-56 221.1 167 64.1
BolC9t60096H Brassica oleracea HOM05D005542 ORTHO05D006708 9.6e-55 217.6 168 63.7
EL10Ac7g16508 Beta vulgaris HOM05D005542 ORTHO05D006708 4.8e-54 215.3 173 61.8
Gohir.A04G076100 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.8e-53 213.4 162 63.6
Gohir.D04G115201 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.2e-51 206.5 218 51.4
MD04G1102900 Malus domestica HOM05D005542 ORTHO05D006708 8.4e-51 204.5 139 70.5
Peaxi162Scf00005g04018 Petunia axillaris HOM05D005542 ORTHO05D006708 3.9e-48 195.7 214 49.5
Atru.chr5.2634 Acer truncatum HOM05D005542 ORTHO05D006708 1.1e-45 187.6 130 70.0
Nitab4.5_0007806g0040 Nicotiana tabacum HOM05D005542 ORTHO05D006708 1.4e-45 187.2 223 45.7
Gorai.009G419800 Gossypium raimondii HOM05D005542 ORTHO05D006708 1.1e-42 177.6 218 46.8
Lalb_Chr06g0171481 Lupinus albus HOM05D005542 ORTHO05D006708 4.2e-42 175.6 222 44.1
Ca_11456_v3 Cicer arietinum L. HOM05D005542 ORTHO05D006708 2.7e-41 172.9 135 60.7
VMungo0720G1693 Vigna mungo HOM05D005542 ORTHO05D006708 6.5e-35 151.8 135 57.0
Rhsim04G0149700 Rhododendron simsii HOM05D005542 ORTHO05D006708 6.7e-32 141.7 89 75.3
ECA233G4004 Erigeron canadensis HOM05D005542 ORTHO05D006708 7.0e-29 131.7 89 70.8
Cpa.g.c48297 Carica papaya HOM05D005542 ORTHO05D006708 1.9e-26 123.6 97 60.8
Cre06.g272400 Chlamydomonas reinhardtii HOM05D005542 ORTHO05D006708 3.0e-16 89.7 209 31.6
PRCOL_00003536 Prasinoderma coloniale HOM05D003144 ORTHO05D003539 1.5e-07 60.8 136 33.8
Potri.005G120400 Populus trichocarpa HOM05D003144 ORTHO05D003539 6.3e-06 55.5 124 31.5


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