Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.3e-68 263.1 149 100.0
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 8.1e-34 147.5 81 92.6
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 5.2e-33 144.8 80 91.2
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 6.8e-33 144.4 81 91.4
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.3e-31 140.2 79 88.6
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 2.2e-31 139.4 78 89.7
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 2.9e-31 139.0 79 87.3
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.9e-31 139.0 79 87.3
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.9e-31 139.0 91 79.1
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 3.8e-31 138.7 108 65.7
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 4.9e-31 138.3 81 84.0
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 4.9e-31 138.3 95 74.7
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 4.9e-31 138.3 78 88.5
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 6.4e-31 137.9 81 82.7
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 1.1e-30 137.1 79 84.8
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.1e-30 137.1 79 86.1
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.1e-30 137.1 78 88.5
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.4e-30 136.7 81 82.7
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.9e-30 136.3 78 87.2
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.9e-30 136.3 78 87.2
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 1.9e-30 136.3 79 83.5
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.4e-30 136.0 77 85.7
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.4e-30 136.0 77 85.7
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 2.4e-30 136.0 78 85.9
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 3.2e-30 135.6 78 85.9
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 4.1e-30 135.2 80 82.5
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 4.1e-30 135.2 80 82.5
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 4.1e-30 135.2 77 85.7
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 5.4e-30 134.8 77 85.7
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 5.4e-30 134.8 77 85.7
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 7.1e-30 134.4 79 83.5
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 7.1e-30 134.4 78 84.6
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 7.1e-30 134.4 77 83.1
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 7.1e-30 134.4 77 83.1
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 9.2e-30 134.0 79 83.5
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.2e-29 133.7 77 85.7
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.6e-29 133.3 77 84.4
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.6e-29 133.3 78 83.3
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.6e-29 133.3 107 68.2
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.6e-29 133.3 79 82.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 2.1e-29 132.9 77 84.4
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 2.1e-29 132.9 78 82.1
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.7e-29 132.5 76 84.2
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 4.6e-29 131.7 80 80.0
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 7.8e-29 131.0 81 79.0
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 7.8e-29 131.0 94 72.3
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 7.8e-29 131.0 115 60.9
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.0e-28 130.6 80 80.0
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 1.0e-28 130.6 77 83.1
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 1.3e-28 130.2 77 81.8
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 1.3e-28 130.2 108 65.7
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.3e-28 130.2 80 78.8
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.3e-28 130.2 109 64.2
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.7e-28 129.8 78 79.5
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 1.7e-28 129.8 77 83.1
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 2.3e-28 129.4 79 81.0
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 2.3e-28 129.4 77 80.5
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 2.3e-28 129.4 81 76.5
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 3.0e-28 129.0 79 81.0
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.0e-28 129.0 79 79.7
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 3.0e-28 129.0 79 79.7
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 3.0e-28 129.0 80 77.5
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 3.0e-28 129.0 78 79.5
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.0e-28 129.0 78 79.5
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 3.0e-28 129.0 78 79.5
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 3.0e-28 129.0 81 76.5
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 3.9e-28 128.6 77 79.2
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.9e-28 128.6 94 71.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 3.9e-28 128.6 80 77.5
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 5.1e-28 128.3 108 62.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.6e-28 127.9 79 78.5
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.1e-27 127.1 75 84.0
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.5e-27 126.7 73 86.3
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 1.9e-27 126.3 80 77.5
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 1.9e-27 126.3 78 79.5
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.5e-27 125.9 109 61.5
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 2.5e-27 125.9 109 61.5
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.5e-27 125.9 109 61.5
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 2.5e-27 125.9 80 75.0
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 4.3e-27 125.2 79 78.5
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 5.6e-27 124.8 95 70.5
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 7.3e-27 124.4 80 73.8
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 7.3e-27 124.4 89 73.0
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 9.6e-27 124.0 78 78.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.2e-26 123.6 109 61.5
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.2e-26 123.6 109 61.5
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.1e-26 122.9 77 75.3
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 2.1e-26 122.9 77 75.3
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 2.1e-26 122.9 75 81.3
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.1e-26 122.9 75 81.3
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.1e-26 122.9 75 81.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.8e-26 122.5 78 73.1
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.8e-26 122.5 77 75.3
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.6e-26 122.1 77 74.0
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 2.4e-25 119.4 71 83.1
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 3.1e-25 119.0 73 78.1
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 4.0e-25 118.6 113 57.5
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 5.2e-25 118.2 72 79.2
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.5e-24 116.7 71 78.9
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.5e-24 116.7 72 79.2
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.7e-23 113.2 82 69.5
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 8.4e-23 110.9 120 52.5
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.9e-22 109.8 77 68.8
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 4.2e-22 108.6 77 67.5
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 5.3e-17 91.7 76 59.2
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.6e-13 80.1 78 50.0
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 2.3e-12 76.3 46 80.4
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 4.8e-10 68.6 79 49.4
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.4e-06 57.0 32 81.2
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.9e-06 56.6 32 81.2


User provided reference genes

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