Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 6.2e-244 847.0 434 100.0
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 1.4e-190 669.8 428 79.7
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 8.8e-190 667.2 437 78.0
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.2e-189 666.8 425 79.8
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.0e-189 666.0 426 78.9
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 1.3e-188 663.3 427 78.7
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 6.3e-188 661.0 436 78.4
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 8.3e-188 660.6 435 76.6
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 4.1e-187 658.3 428 76.9
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 5.4e-187 657.9 429 79.0
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 7.0e-187 657.5 427 77.3
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 7.0e-187 657.5 433 77.4
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 1.6e-186 656.4 435 76.3
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 2.0e-186 656.0 437 76.4
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 2.0e-186 656.0 428 77.1
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 2.7e-186 655.6 427 78.2
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 2.7e-186 655.6 424 75.9
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 4.5e-186 654.8 427 77.0
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 4.5e-186 654.8 432 77.5
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.0e-185 653.7 425 77.4
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.0e-185 653.7 425 77.4
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 1.3e-185 653.3 429 78.6
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.3e-185 653.3 428 78.0
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.3e-185 653.3 436 76.8
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.7e-185 652.9 427 78.9
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 1.7e-185 652.9 428 78.5
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.7e-185 652.9 425 78.4
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 3.8e-185 651.7 429 77.2
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 3.8e-185 651.7 425 76.9
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 6.6e-185 651.0 432 76.2
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 8.6e-185 650.6 428 77.8
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 8.6e-185 650.6 430 78.4
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 1.5e-184 649.8 414 78.0
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.9e-184 649.4 436 76.8
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 2.5e-184 649.0 426 76.8
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 2.5e-184 649.0 435 77.9
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 3.3e-184 648.7 442 76.2
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 4.2e-184 648.3 425 77.2
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 4.2e-184 648.3 425 77.2
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 4.2e-184 648.3 428 77.8
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 4.2e-184 648.3 425 76.7
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 5.5e-184 647.9 425 77.2
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 7.2e-184 647.5 430 78.4
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 9.5e-184 647.1 427 76.8
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 9.5e-184 647.1 427 76.8
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 9.5e-184 647.1 427 76.8
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 9.5e-184 647.1 425 76.9
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 9.5e-184 647.1 428 76.9
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 9.5e-184 647.1 427 75.9
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 9.5e-184 647.1 426 77.7
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 9.5e-184 647.1 400 80.0
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 1.2e-183 646.7 424 76.4
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.2e-183 646.7 428 76.6
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.6e-183 646.4 438 76.5
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 1.6e-183 646.4 427 75.9
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 2.1e-183 646.0 425 76.9
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 2.1e-183 646.0 424 76.9
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 2.1e-183 646.0 424 76.9
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 2.1e-183 646.0 427 76.3
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 2.1e-183 646.0 427 75.6
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 2.1e-183 646.0 428 77.6
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.8e-183 645.6 428 75.9
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.8e-183 645.6 405 78.3
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.6e-183 645.2 438 76.3
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.6e-183 645.2 438 76.3
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 4.7e-183 644.8 435 74.7
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 4.7e-183 644.8 416 77.4
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 6.1e-183 644.4 424 76.4
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 8.0e-183 644.0 428 76.6
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.0e-183 644.0 428 77.6
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 1.0e-182 643.7 431 76.6
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 1.8e-182 642.9 436 76.1
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 1.8e-182 642.9 427 76.3
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.3e-182 642.5 416 77.2
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 4.0e-182 641.7 440 76.6
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 5.2e-182 641.3 427 76.8
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 5.2e-182 641.3 427 74.9
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 5.2e-182 641.3 425 76.9
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 5.2e-182 641.3 425 76.9
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 6.8e-182 641.0 426 75.8
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 8.9e-182 640.6 434 74.9
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 1.5e-181 639.8 434 75.1
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 3.4e-181 638.6 428 75.7
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 3.4e-181 638.6 428 77.1
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.4e-181 638.3 428 76.9
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 4.4e-181 638.3 384 82.3
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.4e-181 638.3 430 76.7
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 5.7e-181 637.9 425 76.0
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 5.7e-181 637.9 425 75.8
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.5e-181 637.5 428 76.9
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.3e-180 636.7 429 76.7
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 2.8e-180 635.6 425 75.8
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 4.9e-180 634.8 424 74.5
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 6.3e-180 634.4 424 74.5
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 3.1e-179 632.1 485 70.3
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 5.4e-179 631.3 444 73.9
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 7.0e-179 630.9 425 75.5
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 2.0e-178 629.4 396 77.8
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.7e-178 629.0 427 74.7
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.7e-178 629.0 456 71.3
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 2.7e-178 629.0 427 74.9
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 3.5e-178 628.6 430 74.7
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 3.5e-178 628.6 427 73.8
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 7.8e-178 627.5 424 75.2
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 1.7e-177 626.3 433 75.5
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 6.6e-177 624.4 435 72.6
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 6.6e-177 624.4 426 73.9
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 2.5e-176 622.5 445 72.4
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 2.5e-176 622.5 425 74.8
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 7.3e-176 620.9 430 74.9
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 1.2e-175 620.2 434 73.5
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.8e-174 614.4 467 70.2
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 7.5e-173 610.9 413 73.4
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 7.5e-173 610.9 424 73.8
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.7e-172 608.6 428 74.5
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 4.9e-172 608.2 425 73.4
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 6.4e-172 607.8 399 76.4
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 3.2e-171 605.5 513 63.4
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 7.8e-170 600.9 423 73.3
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.7e-169 599.7 406 72.2
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 8.6e-169 597.4 438 72.4
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 7.3e-168 594.3 394 76.1
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 3.6e-167 592.0 543 60.6
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 4.7e-167 591.7 393 75.3
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 8.0e-167 590.9 383 75.2
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 1.8e-166 589.7 380 77.9
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 2.0e-165 586.3 393 73.3
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 2.2e-164 582.8 384 75.5
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 2.9e-164 582.4 405 72.1
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 3.7e-164 582.0 382 75.9
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 6.4e-164 581.3 399 72.2
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.5e-160 567.4 425 71.1
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 2.1e-159 566.2 350 77.1
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 2.3e-158 562.8 363 78.0
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 2.2e-156 556.2 360 76.1
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 1.2e-151 540.4 343 79.9
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 4.0e-150 535.4 388 69.1
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.2e-149 533.9 337 79.8
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 1.1e-147 527.3 333 79.9
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 2.1e-143 513.1 361 72.6
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 2.8e-143 512.7 336 78.3
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 6.2e-143 511.5 373 68.9
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 9.9e-141 504.2 344 75.6
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 2.4e-139 499.6 403 64.0
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 3.0e-137 492.7 370 68.1
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 4.8e-135 485.3 372 66.7
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 9.0e-134 481.1 434 61.1
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 9.0e-126 454.5 261 83.9
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 8.7e-121 438.0 355 62.3
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 2.6e-117 426.4 264 78.4
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 5.7e-112 408.7 300 68.3
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.3e-108 397.5 257 80.5
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 1.4e-94 350.9 230 79.6
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.3e-92 344.4 212 76.4
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 5.2e-89 332.4 231 74.5
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 8.0e-82 308.5 355 51.0
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 6.8e-81 305.4 365 46.8
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.0e-76 291.6 190 79.5
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.3e-73 280.4 181 79.6
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 7.7e-69 265.4 154 78.6
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.4e-64 249.6 190 63.7
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.4e-64 249.6 190 63.7
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 2.5e-59 233.8 220 60.9
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 7.5e-56 222.2 146 76.0
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.9e-54 217.6 243 55.1
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 2.5e-43 180.6 156 63.5
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 5.8e-40 169.5 99 80.8
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 4.0e-33 146.7 220 46.8
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.5e-29 133.7 290 38.3
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 3.1e-25 120.6 82 70.7
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 4.9e-23 113.2 60 91.7
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 2.3e-20 104.4 89 64.0
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 1.4e-17 95.1 63 73.0
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 1.4e-17 95.1 63 73.0
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 1.2e-16 92.0 79 59.5
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.2e-16 92.0 90 52.2
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 4.9e-15 86.7 83 55.4
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 4.2e-14 83.6 48 81.2
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 5.5e-14 83.2 46 80.4
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 1.4e-09 68.6 43 74.4
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 2.2e-07 61.2 74 48.6
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 1.4e-06 58.5 74 50.0
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 1.4e-06 58.5 74 48.6


User provided reference genes

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