Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.8e-93 345.9 174 100.0
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.6e-47 192.6 167 63.5
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.2e-46 187.6 166 63.3
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.1e-42 177.2 105 81.0
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 5.5e-42 174.9 101 82.2
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 7.2e-42 174.5 166 57.8
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 9.4e-42 174.1 102 80.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.2e-41 173.7 146 65.8
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.6e-41 173.3 150 60.7
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 2.1e-41 172.9 117 75.2
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 2.7e-41 172.6 159 61.0
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 3.6e-41 172.2 149 63.1
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 4.7e-41 171.8 109 76.1
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 8.0e-41 171.0 133 63.2
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.0e-40 170.6 105 77.1
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.8e-40 169.9 122 68.0
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.3e-40 169.5 109 76.1
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 3.0e-40 169.1 119 68.9
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 5.2e-40 168.3 101 78.2
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 6.7e-40 167.9 137 59.1
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 6.7e-40 167.9 106 78.3
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 8.8e-40 167.5 97 82.5
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.2e-39 167.2 133 63.9
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.5e-39 166.8 103 77.7
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.0e-39 166.4 111 73.9
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 2.0e-39 166.4 133 63.2
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 2.0e-39 166.4 121 71.1
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.6e-39 166.0 154 55.2
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.6e-39 166.0 154 55.2
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 3.3e-39 165.6 154 55.8
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 4.4e-39 165.2 119 69.7
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.4e-39 165.2 154 55.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 5.7e-39 164.9 101 78.2
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 5.7e-39 164.9 101 78.2
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 5.7e-39 164.9 134 66.4
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 5.7e-39 164.9 106 73.6
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 5.7e-39 164.9 117 71.8
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 7.5e-39 164.5 107 76.6
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.3e-38 163.7 105 73.3
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.7e-38 163.3 95 83.2
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 2.8e-38 162.5 93 79.6
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 2.8e-38 162.5 93 79.6
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.8e-38 161.8 128 68.0
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 4.8e-38 161.8 101 76.2
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 4.8e-38 161.8 159 56.0
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 6.3e-38 161.4 121 68.6
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 1.1e-37 160.6 121 69.4
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 1.1e-37 160.6 95 80.0
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.8e-37 159.8 116 70.7
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 4.1e-37 158.7 93 79.6
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 4.1e-37 158.7 101 77.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.1e-37 158.7 101 76.2
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.1e-37 158.7 117 69.2
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 5.3e-37 158.3 128 67.2
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 9.1e-37 157.5 101 75.2
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.1e-37 157.5 101 75.2
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-36 157.1 100 76.0
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.2e-36 157.1 159 54.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.6e-36 156.8 93 78.5
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 2.0e-36 156.4 93 77.4
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.0e-36 156.4 109 69.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.0e-36 156.4 128 62.5
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.7e-36 156.0 110 70.0
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 2.7e-36 156.0 121 64.5
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 5.9e-36 154.8 158 56.3
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 7.7e-36 154.5 106 68.9
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.0e-35 154.1 123 64.2
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.0e-35 154.1 93 81.7
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.3e-35 153.7 162 53.7
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.3e-35 153.7 106 68.9
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.7e-35 153.3 111 69.4
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 2.9e-35 152.5 92 78.3
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.5e-34 150.2 171 51.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.5e-34 150.2 171 51.5
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 5.5e-34 148.3 93 76.3
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 5.5e-34 148.3 106 67.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 5.5e-34 148.3 114 71.1
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 9.4e-34 147.5 155 54.8
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.1e-33 146.4 153 53.6
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 2.7e-33 146.0 123 61.0
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.8e-32 143.3 169 49.7
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 6.8e-32 141.4 116 58.6
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 5.7e-31 138.3 97 66.0
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.7e-30 136.7 155 50.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.8e-29 133.3 78 83.3
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 3.1e-29 132.5 95 65.3
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 4.1e-29 132.1 81 79.0
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.2e-28 130.6 71 85.9
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 7.7e-28 127.9 74 81.1
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 8.6e-27 124.4 128 51.6
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 8.6e-27 124.4 107 61.7
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 4.0e-24 115.5 64 82.8
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 8.9e-24 114.4 76 73.7
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 2.2e-22 109.8 63 79.4
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.1e-21 107.5 62 79.0
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 1.8e-21 106.7 107 55.1
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.0e-19 100.9 58 75.9
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.2e-17 94.0 70 64.3
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 5.0e-11 72.0 89 49.4
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 1.5e-10 70.5 81 51.9
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 1.2e-09 67.4 57 57.9


User provided reference genes

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