Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.3e-108 396.4 187 100.0
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.1e-95 352.4 172 96.5
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 6.7e-70 267.7 183 66.7
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.5e-69 266.5 180 67.2
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.4e-67 260.0 180 66.7
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 2.4e-67 259.2 180 66.7
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 1.2e-66 256.9 179 65.4
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 5.0e-65 251.5 183 63.9
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 1.5e-64 250.0 180 63.9
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 5.5e-64 248.1 180 63.3
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 9.4e-64 247.3 172 65.1
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.2e-63 246.9 178 61.2
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 3.6e-63 245.4 179 62.6
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 4.7e-63 245.0 183 63.4
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.8e-62 243.0 179 61.5
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 5.2e-62 241.5 180 62.2
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 6.7e-62 241.1 183 58.5
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 8.8e-62 240.7 182 60.4
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 8.8e-62 240.7 180 59.4
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.1e-61 240.4 180 59.4
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.1e-61 240.4 180 61.7
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 3.3e-61 238.8 180 57.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 4.4e-61 238.4 182 59.9
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 5.7e-61 238.0 180 62.8
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 5.7e-61 238.0 182 59.9
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.7e-60 236.5 180 60.0
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 6.3e-60 234.6 180 59.4
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 8.2e-60 234.2 182 58.2
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.1e-59 233.8 180 61.7
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.8e-59 233.0 183 57.9
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 5.3e-59 231.5 180 61.7
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 9.1e-59 230.7 182 57.7
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.6e-58 229.9 183 57.9
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 4.5e-58 228.4 183 56.3
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 5.9e-58 228.0 180 56.1
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 5.9e-58 228.0 183 59.0
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.0e-57 227.3 179 57.0
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.3e-57 226.9 183 55.7
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.3e-57 226.9 180 57.8
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.7e-57 226.5 183 56.3
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.2e-57 226.1 187 57.2
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.9e-57 225.7 196 55.6
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.1e-56 223.8 180 55.6
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.5e-56 223.4 187 55.6
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 1.9e-56 223.0 180 57.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.5e-56 222.6 187 56.1
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 3.2e-56 222.2 180 55.6
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 9.4e-56 220.7 216 50.0
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.2e-55 220.3 183 57.9
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.0e-54 217.2 180 57.8
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.0e-54 217.2 183 54.6
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 2.3e-54 216.1 176 57.4
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 5.2e-54 214.9 185 56.2
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 6.8e-54 214.5 180 56.1
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 8.8e-54 214.2 180 55.0
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 3.4e-53 212.2 180 55.0
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 3.4e-53 212.2 180 55.0
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 4.4e-53 211.8 182 53.3
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 4.4e-53 211.8 179 54.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 5.7e-53 211.5 180 51.7
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.3e-52 210.3 180 56.1
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.3e-52 210.3 180 54.4
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.7e-52 209.9 180 52.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 4.8e-52 208.4 183 54.6
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 6.3e-52 208.0 180 53.9
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 6.3e-52 208.0 180 53.9
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.1e-51 207.2 184 53.3
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.4e-51 206.8 182 52.2
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 1.8e-51 206.5 180 53.3
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 3.1e-51 205.7 183 50.8
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 3.1e-51 205.7 183 50.8
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 2.0e-50 203.0 182 50.5
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.0e-50 203.0 178 53.4
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.0e-50 203.0 178 53.4
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 4.5e-50 201.8 184 51.6
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.0e-49 200.7 182 51.1
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 1.0e-49 200.7 182 50.5
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.0e-49 200.7 180 53.9
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.7e-49 199.9 180 53.9
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 3.8e-49 198.7 183 53.0
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 6.5e-49 198.0 158 58.9
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 8.5e-49 197.6 183 49.2
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 3.2e-48 195.7 172 50.6
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 4.2e-48 195.3 237 42.2
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 5.5e-48 194.9 173 50.9
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 7.2e-48 194.5 183 50.3
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 9.4e-48 194.1 184 49.5
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.6e-47 193.4 155 61.9
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 6.1e-47 191.4 184 49.5
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 6.1e-47 191.4 183 49.2
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 8.0e-47 191.0 172 50.0
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 8.0e-47 191.0 213 45.1
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.0e-46 190.7 183 48.1
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 2.0e-45 186.4 184 48.9
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 2.6e-45 186.0 183 48.1
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 4.1e-43 178.7 155 52.3
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 8.6e-41 171.0 162 49.4
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 9.5e-40 167.5 280 36.4
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 9.5e-40 167.5 152 51.3
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.6e-39 166.8 158 48.1
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 3.6e-39 165.6 145 55.9
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 2.6e-37 159.5 151 49.0
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.4e-37 159.1 192 45.8
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.7e-33 146.7 174 40.8
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.7e-33 146.7 173 41.0
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.8e-30 136.7 171 39.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 1.5e-29 133.7 126 50.8
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.2e-26 124.0 130 48.5
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 4.7e-23 112.1 102 52.9
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 3.1e-22 109.4 169 34.3
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.6e-21 106.3 94 54.3
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 7.3e-16 88.2 85 43.5
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.2e-13 80.9 102 37.3
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 3.7e-12 75.9 126 36.5
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.1e-11 74.3 59 54.2
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 2.3e-09 66.6 98 41.8
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 3.0e-09 66.2 61 49.2
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.9e-08 63.5 45 57.8
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 9.6e-08 61.2 46 63.0


User provided reference genes

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