Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1679 Punica granatum HOM05D010815 ORTHO05D011855 2.4e-83 312.0 142 100.0
Eucgr.H00099 Eucalyptus grandis HOM05D010815 ORTHO05D011855 9.5e-16 87.4 113 38.1
Ciclev10007012m.g Citrus clementina HOM05D010815 ORTHO05D011855 1.2e-13 80.5 128 33.6
Nn1g03102 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.4e-13 78.6 119 33.6
Atru.chr4.3198 Acer truncatum HOM05D000256 ORTHO05D000119 1.1e-11 73.9 111 31.5
Gorai.007G244400 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.1e-11 73.9 113 29.2
Duzib187G0570 Durio zibethinus HOM05D000256 ORTHO05D000119 1.4e-11 73.6 141 28.4
TAR636G2210 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.4e-11 73.6 118 37.3
Gohir.A11G198542 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.8e-11 73.2 113 29.2
TAR362G1185 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.4e-11 72.8 132 27.3
Duzib147G1057 Durio zibethinus HOM05D010815 ORTHO05D011855 5.4e-11 71.6 130 29.2
Aqoxy3G01490 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 7.0e-11 71.2 146 30.1
MD15G1135600 Malus domestica HOM05D015853 ORTHO05D000119 7.0e-11 71.2 112 33.9
Nn1g08718 Nelumbo nucifera HOM05D000256 ORTHO05D000119 7.0e-11 71.2 113 31.9
Nn1g08741 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.0e-10 69.7 113 31.0
Nn1g08742 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.0e-10 69.7 113 31.0
Gohir.A12G078544 Gossypium hirsutum HOM05D010815 ORTHO05D011855 3.5e-10 68.9 132 28.8
Hma1.2p1_0218F.1_g092320 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 3.5e-10 68.9 119 30.3
MD06G1010600 Malus domestica HOM05D000256 ORTHO05D000119 3.5e-10 68.9 111 32.4
Gorai.008G102800 Gossypium raimondii HOM05D010815 ORTHO05D011855 5.9e-10 68.2 131 29.0
Gohir.D12G094450 Gossypium hirsutum HOM05D010815 ORTHO05D011855 7.8e-10 67.8 131 29.0
Nn6g34635 Nelumbo nucifera HOM05D000256 ORTHO05D000119 7.8e-10 67.8 126 30.2
TAR365G0192 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.3e-09 67.0 131 29.0
Glyma.13G129200 Glycine max HOM05D000256 ORTHO05D000119 1.7e-09 66.6 142 29.6
TAR365G0089 Trochodendron aralioides HOM05D000256 ORTHO05D000119 1.7e-09 66.6 131 29.0
Nn1g08705 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.3e-09 66.2 143 28.7
Phvul.008G063600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.3e-08 62.4 114 32.5
Phvul.008G062900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 4.3e-08 62.0 105 31.4
Ciclev10026952m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.6e-08 61.6 108 29.6
Atru.chr8.2531 Acer truncatum HOM05D000256 ORTHO05D000119 7.3e-08 61.2 94 31.9
CSS0039783 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 7.3e-08 61.2 111 33.3
Sed0022717 Sechium edule HOM05D000256 ORTHO05D000119 7.3e-08 61.2 114 25.4
Atru.chr8.2528 Acer truncatum HOM05D000256 ORTHO05D000119 1.2e-07 60.5 105 29.5
MD10G1170300 Malus domestica HOM05D000256 ORTHO05D000119 1.6e-07 60.1 121 30.6
Sabra18G0122800 Salix brachista HOM05D000256 ORTHO05D000119 1.6e-07 60.1 90 36.7
Nn1g08794 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.1e-07 59.7 131 26.7
CARHR207390 Cardamine hirsuta HOM05D000256 ORTHO05D000119 2.8e-07 59.3 135 25.2
Hma1.2p1_2329F.1_g320010 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 2.8e-07 59.3 146 25.3
CsaV3_3G028660 Cucumis sativus L. HOM05D000256 ORTHO05D000119 3.6e-07 58.9 146 26.7
Lalb_Chr23g0277371 Lupinus albus HOM05D000256 ORTHO05D000119 3.6e-07 58.9 117 29.9
Lalb_Chr23g0277421 Lupinus albus HOM05D000256 ORTHO05D000119 3.6e-07 58.9 117 29.9
Sabra18G0122400 Salix brachista HOM05D000256 ORTHO05D000119 3.6e-07 58.9 90 35.6
Sabra18G0124400 Salix brachista HOM05D000256 ORTHO05D000119 3.6e-07 58.9 91 35.2
MELO3C003588.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.7e-07 58.5 100 31.0
Sabra18G0125700 Salix brachista HOM05D000256 ORTHO05D000119 6.1e-07 58.2 90 35.6
Aqoxy3G02792 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 8.0e-07 57.8 122 26.2
Sabra18G0124500 Salix brachista HOM05D000256 ORTHO05D000119 1.0e-06 57.4 87 35.6
GSVIVG01014872001 Vitis vinifera HOM05D000256 ORTHO05D000119 1.0e-06 57.4 87 39.1
Hma1.2p1_0146F.1_g065590 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 1.4e-06 57.0 120 29.2
Sabra18G0129500 Salix brachista HOM05D000309 ORTHO05D000271 1.4e-06 57.0 87 35.6
MD05G1182000 Malus domestica HOM05D000256 ORTHO05D000119 1.8e-06 56.6 137 27.7
Sabra18G0123700 Salix brachista HOM05D000256 ORTHO05D000119 2.3e-06 56.2 108 31.5
Sed0012624 Sechium edule HOM05D000256 ORTHO05D000119 2.3e-06 56.2 145 23.4
Lalb_Chr23g0277431 Lupinus albus HOM05D000256 ORTHO05D000119 3.0e-06 55.8 117 29.9
Prupe.8G208400 Prunus persica HOM05D000256 ORTHO05D000119 3.0e-06 55.8 118 28.8
ClCG07G001680 Citrullus lanatus HOM05D000256 ORTHO05D000119 4.0e-06 55.5 113 27.4
Lalb_Chr15g0076181 Lupinus albus HOM05D000256 ORTHO05D000119 4.0e-06 55.5 109 28.4
Lalb_Chr23g0277441 Lupinus albus HOM05D000256 ORTHO05D000119 4.0e-06 55.5 117 29.9
Ciclev10006952m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.2e-06 55.1 93 29.0
TAR362G0888 Trochodendron aralioides HOM05D000256 ORTHO05D000119 6.8e-06 54.7 76 36.8
Lalb_Chr17g0336901 Lupinus albus HOM05D000256 ORTHO05D000119 8.9e-06 54.3 98 30.6
Lalb_Chr17g0336911 Lupinus albus HOM05D000256 ORTHO05D000119 8.9e-06 54.3 98 29.6
Lalb_Chr23g0277461 Lupinus albus HOM05D000256 ORTHO05D000119 8.9e-06 54.3 117 29.1
Phvul.003G123700 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 8.9e-06 54.3 96 30.2
VMungo1383G0495 Vigna mungo HOM05D000256 ORTHO05D000119 8.9e-06 54.3 83 30.1
GSVIVG01014874001 Vitis vinifera HOM05D000256 ORTHO05D000119 8.9e-06 54.3 108 29.6


User provided reference genes

Program Settings