Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.0e-157 558.5 294 100.0
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.7e-107 393.3 280 70.4
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 3.1e-106 389.0 295 66.8
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.7e-104 383.3 297 68.0
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.9e-104 382.5 267 73.0
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 5.6e-103 378.3 299 70.6
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 7.3e-103 377.9 264 74.6
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 1.2e-102 377.1 298 70.8
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 3.6e-102 375.6 282 71.3
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 3.6e-102 375.6 277 70.8
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 6.1e-102 374.8 284 70.4
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 8.0e-102 374.4 271 69.4
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 4.0e-101 372.1 298 65.4
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 5.2e-101 371.7 291 68.7
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 5.2e-101 371.7 297 68.7
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 8.9e-101 370.9 290 69.7
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.5e-100 370.2 290 69.7
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.6e-100 369.4 283 70.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 3.4e-100 369.0 299 63.5
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 7.5e-100 367.9 269 72.1
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 9.8e-100 367.5 277 72.6
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 1.3e-99 367.1 277 72.6
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 2.2e-99 366.3 271 70.1
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.2e-99 366.3 304 63.8
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.2e-99 366.3 304 63.5
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.1e-98 364.0 304 63.5
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.1e-98 364.0 294 66.0
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 9.2e-98 360.9 273 69.6
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 2.0e-97 359.8 272 68.8
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 2.0e-97 359.8 268 71.6
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 4.6e-97 358.6 272 69.1
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 4.6e-97 358.6 231 78.8
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 7.8e-97 357.8 279 66.7
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 2.3e-96 356.3 292 65.8
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 3.0e-96 355.9 270 69.3
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 3.9e-96 355.5 230 79.1
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 3.9e-96 355.5 275 66.2
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.1e-95 354.0 312 61.2
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 1.1e-95 354.0 266 68.0
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.5e-95 353.6 295 66.8
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.3e-95 352.4 284 67.3
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 5.6e-95 351.7 291 63.6
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 7.3e-95 351.3 232 77.6
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.6e-94 350.1 270 69.3
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 1.6e-94 350.1 267 68.5
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.1e-94 349.7 291 64.9
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 3.6e-94 349.0 284 66.2
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.7e-94 348.6 338 57.4
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 6.2e-94 348.2 235 74.9
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 8.0e-94 347.8 289 65.1
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 1.8e-93 346.7 268 66.0
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 2.3e-93 346.3 292 64.7
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 3.1e-93 345.9 282 66.0
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 3.1e-93 345.9 269 67.3
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 2.0e-92 343.2 236 72.5
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 4.4e-92 342.0 273 65.6
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 9.8e-92 340.9 270 69.3
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.7e-91 340.1 242 69.8
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 2.2e-91 339.7 262 69.5
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 3.7e-91 339.0 262 69.5
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 3.7e-91 339.0 262 69.5
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 3.7e-91 339.0 262 69.5
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 6.4e-91 338.2 246 71.5
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 8.3e-91 337.8 261 69.7
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 1.4e-90 337.0 265 69.4
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 1.4e-90 337.0 265 69.4
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 1.9e-90 336.7 261 69.3
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 2.4e-90 336.3 337 53.7
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 3.2e-90 335.9 279 65.6
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 3.2e-90 335.9 278 65.1
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 3.2e-90 335.9 279 65.2
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 3.2e-90 335.9 270 68.5
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 4.1e-90 335.5 278 65.1
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 4.1e-90 335.5 232 74.6
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 5.4e-90 335.1 277 67.5
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 9.2e-90 334.3 269 68.4
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.2e-89 334.0 236 70.3
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 3.5e-89 332.4 226 73.9
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 3.5e-89 332.4 226 73.9
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 1.0e-88 330.9 283 62.5
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 1.3e-88 330.5 278 65.1
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 1.7e-88 330.1 247 68.8
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 5.0e-88 328.6 252 66.7
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 6.6e-88 328.2 243 69.5
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 1.5e-87 327.0 252 66.7
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 3.3e-87 325.9 243 69.5
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 9.5e-87 324.3 250 64.8
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 2.8e-86 322.8 250 64.0
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 3.6e-86 322.4 251 66.9
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 4.7e-86 322.0 268 64.2
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 8.1e-86 321.2 296 59.1
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 9.8e-84 314.3 274 62.4
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.4e-82 310.5 222 67.1
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 2.4e-82 309.7 229 67.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 3.6e-78 295.8 230 66.1
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 6.2e-78 295.0 257 61.5
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 8.9e-77 291.2 241 63.9
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 7.8e-73 278.1 268 60.4
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 3.4e-68 262.7 196 69.4
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.3e-67 260.8 238 58.8
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 9.9e-60 234.6 165 73.9
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.3e-59 234.2 250 54.4
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 2.2e-59 233.4 279 49.1
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 9.6e-47 191.4 207 48.8
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 9.6e-47 191.4 202 54.0
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 2.8e-46 189.9 129 73.6
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 2.0e-44 183.7 151 61.6
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 2.2e-43 180.3 194 46.9
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 3.8e-43 179.5 191 55.0
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.1e-42 177.9 211 46.0
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 3.5e-41 172.9 197 45.7
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 3.0e-40 169.9 133 65.4
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 7.4e-39 165.2 204 43.1
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.2e-36 157.9 130 63.8
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 2.9e-35 153.3 87 82.8
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.3e-30 137.9 91 76.9
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 5.5e-26 122.5 91 68.1
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 8.8e-24 115.2 87 67.8
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 8.5e-19 98.6 60 78.3
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 7.2e-18 95.5 133 46.6
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 4.8e-14 82.8 104 51.9
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 1.8e-13 80.9 51 72.5
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 1.3e-11 74.7 218 26.6
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 6.7e-08 62.4 34 85.3


User provided reference genes

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