Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 9.9e-164 580.1 303 100.0
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 1.4e-130 469.9 303 78.9
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 4.2e-130 468.4 303 79.2
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 5.5e-130 468.0 303 79.5
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 7.2e-130 467.6 303 78.9
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 7.2e-130 467.6 303 78.5
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 2.7e-129 465.7 305 80.0
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 6.1e-129 464.5 303 77.9
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 1.0e-128 463.8 303 77.6
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.0e-128 463.8 303 77.6
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 2.3e-128 462.6 304 77.0
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-128 462.2 303 77.2
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.1e-128 461.5 303 77.2
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 4.4e-127 458.4 303 77.2
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 7.4e-127 457.6 304 78.0
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 7.4e-127 457.6 312 76.3
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.7e-127 457.2 303 76.6
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.3e-126 456.8 303 77.9
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 2.2e-126 456.1 314 76.4
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 3.7e-126 455.3 303 77.9
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.1e-125 453.8 303 77.6
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 4.1e-125 451.8 312 75.3
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 5.3e-125 451.4 307 77.5
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 5.3e-125 451.4 312 75.0
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 6.9e-125 451.1 312 74.4
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 9.1e-125 450.7 303 76.9
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 1.2e-124 450.3 303 77.2
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 2.0e-124 449.5 305 76.4
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 5.9e-124 448.0 306 76.1
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 1.3e-123 446.8 331 71.3
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 1.3e-123 446.8 331 71.3
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.7e-123 446.4 303 75.2
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 5.0e-123 444.9 312 74.4
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 6.5e-123 444.5 303 75.2
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.1e-122 443.7 303 75.6
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.1e-122 443.7 303 75.2
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.9e-122 443.0 303 75.6
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 2.5e-122 442.6 308 73.4
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.5e-122 442.6 308 74.4
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 2.5e-122 442.6 303 74.3
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 2.5e-122 442.6 307 75.9
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 2.5e-122 442.6 309 73.5
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 2.5e-122 442.6 303 75.2
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 3.2e-122 442.2 303 74.9
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 3.2e-122 442.2 303 75.2
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 9.4e-122 440.7 277 79.1
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 9.4e-122 440.7 306 72.2
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.2e-121 440.3 305 75.1
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.2e-121 440.3 305 75.1
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 1.6e-121 439.9 306 76.8
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 2.1e-121 439.5 306 76.1
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 2.7e-121 439.1 308 72.1
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 3.6e-121 438.7 306 72.2
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 3.6e-121 438.7 303 74.6
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 6.1e-121 438.0 308 71.8
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 6.1e-121 438.0 270 80.4
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 1.0e-120 437.2 303 74.9
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 1.4e-120 436.8 308 72.4
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 1.4e-120 436.8 308 73.4
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.8e-120 436.4 306 72.2
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 2.3e-120 436.0 303 73.9
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 2.3e-120 436.0 277 77.6
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.3e-120 436.0 308 72.4
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 3.0e-120 435.6 306 71.6
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.9e-120 435.3 308 72.4
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.9e-120 435.3 303 75.2
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 6.7e-120 434.5 306 72.2
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 6.7e-120 434.5 303 74.6
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 8.8e-120 434.1 311 74.6
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 2.0e-119 433.0 307 70.7
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 7.4e-119 431.0 303 73.3
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 2.8e-118 429.1 307 71.3
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 6.3e-118 427.9 271 77.1
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.4e-117 426.8 307 72.3
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.4e-117 426.8 309 74.1
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 2.4e-117 426.0 305 71.1
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 4.1e-117 425.2 308 74.4
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 5.3e-117 424.9 280 76.4
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 7.0e-117 424.5 307 71.0
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 3.5e-116 422.2 335 66.3
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 2.9e-115 419.1 308 70.5
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 2.9e-115 419.1 349 64.8
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 1.6e-113 413.3 301 70.1
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 2.7e-113 412.5 290 74.8
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 1.8e-112 409.8 312 67.9
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 3.0e-112 409.1 322 70.2
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 2.7e-108 396.0 294 69.0
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 4.5e-108 395.2 303 67.3
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.5e-106 390.2 306 67.0
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 4.2e-106 388.7 324 65.1
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 2.1e-105 386.3 304 69.1
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 6.8e-104 381.3 321 64.5
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 5.4e-101 371.7 320 63.1
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.2e-100 370.5 343 60.3
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 2.0e-95 353.2 317 60.3
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.7e-94 350.1 233 79.4
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 7.8e-92 341.3 272 65.4
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.2e-87 327.4 299 57.9
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 4.9e-86 322.0 228 73.2
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.1e-85 320.9 237 71.3
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 3.3e-82 309.3 313 55.3
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 5.6e-82 308.5 202 79.7
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.9e-78 296.2 257 63.4
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 5.2e-72 275.4 303 50.8
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.5e-71 273.9 209 69.4
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 6.4e-62 241.9 261 48.3
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.6e-57 227.3 192 65.1
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 2.0e-55 220.3 263 45.2
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 5.8e-55 218.8 317 42.3
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 3.9e-51 206.1 155 72.9
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 4.3e-50 202.6 300 39.7
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 1.9e-42 177.2 245 42.9
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 9.6e-42 174.9 241 41.1
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.1e-37 161.4 182 52.7
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.7e-35 151.8 116 66.4
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 6.5e-30 135.6 243 38.3
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.1e-28 130.6 88 73.9
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 7.9e-20 102.1 74 66.2
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.5e-18 97.1 93 58.1
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.1e-16 89.7 81 59.3
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 4.5e-15 86.3 135 43.7
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 8.8e-11 72.0 79 55.7
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.5e-07 61.2 57 45.6


User provided reference genes

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