Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 7.6e-92 340.5 173 100.0
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 7.7e-36 154.5 168 48.8
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 1.3e-35 153.7 161 52.2
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 2.9e-35 152.5 157 51.6
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 4.2e-34 148.7 169 46.7
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.2e-33 147.1 169 46.2
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 2.7e-33 146.0 169 47.9
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 3.9e-32 142.1 166 45.8
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 8.8e-32 141.0 157 49.7
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 1.1e-31 140.6 173 45.7
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 3.3e-31 139.0 156 51.3
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 3.3e-31 139.0 169 50.9
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 4.4e-31 138.7 162 48.1
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 9.7e-31 137.5 172 44.2
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 1.7e-30 136.7 161 47.2
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.7e-30 136.7 166 46.4
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 3.7e-30 135.6 166 44.0
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 4.8e-30 135.2 159 49.7
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 4.8e-30 135.2 133 53.4
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 3.1e-29 132.5 169 47.9
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.6e-28 129.4 123 55.3
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 3.5e-28 129.0 167 43.7
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 3.5e-28 129.0 175 44.6
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 1.0e-27 127.5 171 45.0
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 1.3e-27 127.1 123 52.0
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 2.9e-27 125.9 126 50.8
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 6.5e-27 124.8 171 43.9
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 1.1e-26 124.0 170 46.5
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 1.5e-26 123.6 172 42.4
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 3.2e-26 122.5 174 44.3
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 7.2e-26 121.3 152 48.0
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 1.2e-25 120.6 169 40.8
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 1.2e-25 120.6 131 47.3
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.2e-25 120.6 130 48.5
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 2.1e-25 119.8 146 48.6
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 2.7e-25 119.4 127 52.0
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 2.7e-25 119.4 133 47.4
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 3.6e-25 119.0 127 52.0
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 6.1e-25 118.2 164 42.7
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 8.0e-25 117.9 125 50.4
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 8.0e-25 117.9 125 50.4
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 1.4e-24 117.1 120 49.2
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 2.3e-24 116.3 166 42.8
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 2.3e-24 116.3 143 44.1
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 6.7e-24 114.8 152 42.8
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 6.7e-24 114.8 170 41.2
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 8.8e-24 114.4 157 43.9
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 1.1e-23 114.0 152 42.8
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 1.1e-23 114.0 134 44.8
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 1.5e-23 113.6 163 42.9
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 1.5e-23 113.6 157 42.7
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.0e-23 113.2 152 42.1
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 3.3e-23 112.5 131 45.0
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 4.4e-23 112.1 169 43.8
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 5.7e-23 111.7 133 46.6
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 5.7e-23 111.7 127 47.2
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 5.7e-23 111.7 139 48.2
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 7.5e-23 111.3 138 44.2
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 9.7e-23 110.9 126 46.8
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 9.7e-23 110.9 123 47.2
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 1.3e-22 110.5 142 45.1
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 2.8e-22 109.4 122 45.9
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.8e-22 109.4 150 42.0
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 2.8e-22 109.4 110 50.0
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 2.8e-22 109.4 164 40.2
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.7e-22 109.0 126 48.4
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 4.8e-22 108.6 128 46.1
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.8e-21 106.7 151 38.4
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 7.0e-21 104.8 184 35.9
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 7.0e-21 104.8 115 47.8
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 9.1e-21 104.4 157 40.1
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 9.1e-21 104.4 110 49.1
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 1.2e-20 104.0 112 46.4
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 1.6e-20 103.6 156 39.7
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 1.6e-20 103.6 169 34.9
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 2.0e-20 103.2 128 40.6
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.3e-19 100.5 174 36.8
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 1.7e-19 100.1 121 49.6
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.7e-19 100.1 140 42.9
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 2.9e-19 99.4 154 39.6
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 5.0e-19 98.6 151 37.1
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.5e-18 97.1 170 32.9
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.5e-18 97.1 174 35.6
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 7.2e-18 94.7 144 36.8
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 3.6e-17 92.4 134 41.0
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 5.2e-16 88.6 154 36.4
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 1.4e-13 80.5 68 54.4
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 1.6e-12 77.0 68 52.9
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 2.0e-12 76.6 119 37.0
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 7.7e-12 74.7 117 44.4
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 7.7e-12 74.7 63 55.6
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.3e-11 73.9 104 38.5
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 2.6e-07 59.7 57 52.6
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 4.4e-07 58.9 65 50.8


User provided reference genes

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