Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 3.0e-237 824.7 396 100.0
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 6.7e-128 461.5 393 57.3
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 1.5e-127 460.3 389 56.6
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 7.4e-127 458.0 392 56.9
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.2e-126 456.4 404 56.2
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 1.8e-125 453.4 390 56.4
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.5e-124 450.3 392 55.6
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 8.5e-123 444.5 391 56.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 6.1e-121 438.3 386 55.2
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.4e-120 437.2 386 55.2
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 3.0e-120 436.0 386 55.2
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 2.6e-119 433.0 398 54.0
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.6e-119 433.0 402 54.7
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 3.3e-119 432.6 409 54.0
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 9.7e-119 431.0 404 54.5
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 8.2e-118 427.9 390 54.1
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 2.4e-117 426.4 403 54.3
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 2.4e-117 426.4 395 52.9
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 4.1e-117 425.6 407 53.8
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 2.6e-116 422.9 399 52.4
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 3.5e-116 422.5 396 54.5
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 4.5e-116 422.2 409 53.8
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.3e-115 420.6 413 53.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 8.5e-115 417.9 401 50.9
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 8.5e-115 417.9 398 52.0
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 7.2e-114 414.8 392 50.8
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 4.7e-113 412.1 396 51.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.2e-111 407.5 388 52.3
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 4.4e-111 405.6 395 51.6
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.3e-110 404.1 400 49.2
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.3e-110 404.1 388 52.3
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 2.4e-109 399.8 410 49.5
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 6.5e-107 391.7 385 49.6
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 2.5e-106 389.8 389 51.9
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 2.1e-105 386.7 388 49.2
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 2.3e-104 383.3 385 49.1
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 4.4e-103 379.0 391 49.4
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 1.7e-102 377.1 357 51.0
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 8.3e-102 374.8 377 50.4
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 5.4e-101 372.1 393 48.6
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 5.9e-100 368.6 323 55.7
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.0e-99 365.5 320 54.7
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.1e-98 364.4 320 55.3
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 2.8e-97 359.8 395 45.3
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.4e-96 357.5 404 45.0
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 6.8e-96 355.1 399 45.1
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.0e-95 353.6 365 48.5
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.0e-95 353.6 399 44.9
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 7.5e-95 351.7 405 44.9
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 3.7e-94 349.4 403 45.2
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 1.4e-93 347.4 403 44.9
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.8e-93 347.1 406 44.6
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.8e-93 347.1 397 46.3
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 3.1e-93 346.3 407 44.5
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 5.4e-93 345.5 402 44.3
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 5.4e-93 345.5 402 44.3
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 5.9e-92 342.0 401 47.9
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.3e-90 336.3 320 52.2
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 7.5e-87 325.1 406 43.8
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 7.5e-87 325.1 406 43.6
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.6e-84 317.4 361 44.6
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 2.7e-84 316.6 385 41.6
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 1.7e-83 313.9 363 44.1
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 1.5e-82 310.8 363 44.6
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 9.5e-82 308.1 300 49.3
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 3.6e-81 306.2 349 45.0
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.8e-80 303.9 318 51.6
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.6e-73 279.6 389 41.6
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 1.1e-64 251.5 387 35.4
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 6.6e-51 205.7 205 48.8
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.3e-41 174.9 240 40.8
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.7e-25 120.2 124 44.4


User provided reference genes

Program Settings