Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 6.7e-159 563.9 278 100.0
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.5e-86 323.6 283 59.7
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.3e-85 320.5 279 62.4
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 2.9e-85 319.3 286 60.1
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 2.5e-84 316.2 285 60.0
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 4.2e-84 315.5 286 59.8
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.2e-84 315.5 278 60.1
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.2e-84 315.5 282 61.3
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 4.2e-84 315.5 289 57.8
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.2e-83 313.9 291 59.8
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.1e-83 313.2 279 60.2
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 3.5e-83 312.4 288 58.7
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 7.9e-83 311.2 281 60.5
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.0e-82 310.8 286 60.8
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.8e-82 310.1 284 58.1
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 6.7e-82 308.1 281 59.4
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 8.7e-82 307.8 290 57.6
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.1e-81 307.4 279 59.1
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.9e-81 306.6 278 59.7
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 2.5e-81 306.2 289 58.5
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 5.6e-81 305.1 286 58.0
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 4.8e-80 302.0 280 56.8
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 1.4e-79 300.4 293 54.9
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 1.8e-79 300.1 287 59.2
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 2.4e-79 299.7 287 57.1
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 5.3e-79 298.5 278 57.2
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 5.3e-79 298.5 194 72.7
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 3.4e-78 295.8 186 75.3
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 5.8e-78 295.0 286 54.5
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 3.8e-77 292.4 235 64.7
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 4.9e-77 292.0 297 54.2
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 6.5e-77 291.6 295 55.9
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 6.5e-77 291.6 288 55.9
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 8.4e-77 291.2 287 57.1
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 7.1e-76 288.1 280 57.5
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 7.1e-76 288.1 262 58.4
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.2e-75 287.3 278 56.5
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.6e-75 287.0 194 70.6
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.6e-75 287.0 296 53.7
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 2.1e-75 286.6 242 61.2
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 3.5e-75 285.8 193 69.9
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 3.5e-75 285.8 293 56.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 3.5e-75 285.8 281 55.9
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 4.6e-75 285.4 281 56.2
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 6.0e-75 285.0 189 70.9
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 7.9e-75 284.6 277 56.7
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.3e-74 283.9 286 53.8
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.8e-74 283.5 228 64.0
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.8e-74 283.5 257 56.4
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 1.8e-74 283.5 263 57.0
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 1.8e-74 283.5 263 57.0
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 1.8e-74 283.5 263 57.0
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 1.8e-74 283.5 289 56.7
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.8e-74 283.5 281 54.8
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 3.0e-74 282.7 294 54.8
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 5.1e-74 282.0 198 67.2
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 5.1e-74 282.0 263 57.0
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 8.7e-74 281.2 301 53.5
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.1e-73 280.8 289 54.0
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.1e-73 280.8 298 54.0
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 1.5e-73 280.4 279 54.8
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 5.7e-73 278.5 199 66.8
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 5.7e-73 278.5 282 53.2
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 5.7e-73 278.5 295 53.6
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 1.3e-72 277.3 236 60.2
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.6e-72 276.9 290 55.9
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 2.8e-72 276.2 198 67.2
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 6.3e-72 275.0 185 69.7
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 8.2e-72 274.6 198 67.7
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.1e-71 274.2 314 51.6
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.8e-71 273.5 278 55.0
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 3.1e-71 272.7 185 69.2
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 6.9e-71 271.6 207 63.8
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 3.4e-70 269.2 298 51.7
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.7e-69 266.9 194 66.0
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 2.9e-69 266.2 298 51.7
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 2.7e-67 259.6 169 72.8
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.4e-66 257.3 238 55.5
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 6.7e-66 255.0 325 47.7
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.0e-65 253.4 222 56.8
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 9.7e-65 251.1 282 52.5
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.5e-62 243.8 290 50.0
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 5.0e-61 238.8 168 67.9
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 5.5e-60 235.3 176 64.2
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 6.1e-59 231.9 154 73.4
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 1.0e-58 231.1 163 68.7
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.8e-55 220.3 303 45.9
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.4e-55 219.9 159 67.3
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 2.2e-53 213.4 154 69.5
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.1e-52 211.1 177 61.0
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.9e-52 210.3 210 55.2
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.1e-49 201.1 153 66.7
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.6e-49 199.9 170 58.8
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 3.7e-48 196.1 289 43.3
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 4.8e-48 195.7 242 44.2
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 2.0e-46 190.3 193 49.2
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 4.5e-46 189.1 243 43.6
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 5.9e-46 188.7 218 53.2
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.3e-45 187.6 203 47.3
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 5.5e-44 182.2 247 45.3
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 8.3e-40 168.3 200 46.5
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.2e-38 164.5 236 46.2
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 2.7e-38 163.3 193 45.1
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.2e-36 156.4 282 40.8
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.0e-34 151.4 96 72.9
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.8e-32 143.3 292 37.3
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 6.3e-32 142.1 249 37.3
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.0e-29 134.8 94 67.0
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 8.6e-29 131.7 195 37.4
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 4.2e-28 129.4 289 32.5
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 3.0e-26 123.2 82 68.3
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 1.8e-23 114.0 181 37.0
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.1e-20 104.8 69 66.7
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 9.8e-09 65.1 51 54.9


User provided reference genes

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