Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1258 Punica granatum HOM05D000005 ORTHO05D336662 1.3e-55 219.5 114 100.0
PGR142G2421 Punica granatum HOM05D000005 ORTHO05D000012 5.2e-49 197.6 113 91.2
PGR142G3250 Punica granatum HOM05D000005 ORTHO05D000012 7.0e-46 187.2 113 86.7
PGR142G2950 Punica granatum HOM05D000005 ORTHO05D000012 2.7e-45 185.3 113 86.7
PGR142G4245 Punica granatum HOM05D000005 ORTHO05D000012 2.7e-45 185.3 113 86.7
PGR142G3252 Punica granatum HOM05D000005 ORTHO05D000012 1.0e-44 183.3 113 84.1
PGR142G2663 Punica granatum HOM05D000005 ORTHO05D000012 1.9e-43 179.1 113 84.1
PGR142G2275 Punica granatum HOM05D000005 ORTHO05D000012 7.6e-24 114.0 112 52.7
PGR031G3146 Punica granatum HOM05D000005 ORTHO05D336901 9.9e-24 113.6 84 69.0
PGR102G0368 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-22 109.8 113 49.6
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-21 106.7 113 48.7
PGR142G2900 Punica granatum HOM05D000005 ORTHO05D000012 3.0e-20 102.1 113 44.2
PGR044G1968 Punica granatum HOM05D000005 ORTHO05D011898 3.9e-20 101.7 109 50.5
PGR044G0008 Punica granatum HOM05D000005 ORTHO05D011898 1.9e-19 99.4 109 51.4
PGR044G1253 Punica granatum HOM05D000005 ORTHO05D000012 1.9e-19 99.4 106 50.0
PGR044G2177 Punica granatum HOM05D000005 ORTHO05D011898 7.3e-19 97.4 108 50.0
PGR044G1251 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-18 96.7 107 47.7
PGR044G0375 Punica granatum HOM05D000005 ORTHO05D000012 1.6e-18 96.3 106 48.1
PGR044G1265 Punica granatum HOM05D000005 ORTHO05D011898 2.1e-18 95.9 116 49.1
PGR142G2220 Punica granatum HOM05D000005 ORTHO05D000012 2.1e-18 95.9 112 48.2
PGR044G1624 Punica granatum HOM05D000005 ORTHO05D011459 3.6e-18 95.1 113 46.9
PGR044G0067 Punica granatum HOM05D000005 ORTHO05D011898 4.8e-18 94.7 106 48.1
PGR044G1147 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-18 94.7 106 47.2
PGR142G3211 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-18 94.7 112 47.3
PGR044G0475 Punica granatum HOM05D000005 ORTHO05D011898 8.1e-18 94.0 106 47.2
PGR044G1867 Punica granatum HOM05D000005 ORTHO05D000012 8.1e-18 94.0 106 47.2
PGR044G2159 Punica granatum HOM05D000005 ORTHO05D011898 5.3e-17 91.3 109 45.9
PGR044G2368 Punica granatum HOM05D000005 ORTHO05D011898 9.0e-17 90.5 106 46.2
PGR044G0444 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-16 90.1 106 46.2
PGR044G0318 Punica granatum HOM05D000005 ORTHO05D000012 1.5e-16 89.7 133 42.1
PGR044G1211 Punica granatum HOM05D000005 ORTHO05D011459 3.4e-16 88.6 113 44.2
Eucgr.H02359 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-15 86.3 108 44.4
PGR042G1761 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-15 85.9 137 39.4
Eucgr.F02533 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.4e-15 84.3 108 44.4
Eucgr.C01654 Eucalyptus grandis HOM05D000005 ORTHO05D017911 8.4e-15 84.0 110 42.7
Eucgr.L00700 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.4e-14 83.2 106 45.3
Eucgr.K01937 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-14 82.8 108 43.5
PGR044G0500 Punica granatum HOM05D000005 ORTHO05D011459 2.4e-14 82.4 128 39.8
Eucgr.C03975 Eucalyptus grandis HOM05D000005 ORTHO05D007073 4.2e-14 81.6 109 44.0
Eucgr.H02362 Eucalyptus grandis HOM05D000005 ORTHO05D194979 4.2e-14 81.6 108 43.5
Eucgr.E01998 Eucalyptus grandis HOM05D000005 ORTHO05D011459 5.4e-14 81.3 109 40.4
Eucgr.D01599 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.2e-13 80.1 109 41.3
Eucgr.E01983 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.6e-13 79.7 109 38.5
Eucgr.E01990 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.6e-13 79.7 109 38.5
Eucgr.F03896 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.6e-13 79.7 108 42.6
Eucgr.E02004 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.1e-13 79.3 109 41.3
Eucgr.F04311 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.7e-13 79.0 108 41.7
Eucgr.C02570 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.6e-13 78.2 106 45.3
PGR044G0625 Punica granatum HOM05D000005 ORTHO05D000012 4.6e-13 78.2 128 37.5
Eucgr.K00847 Eucalyptus grandis HOM05D000005 ORTHO05D035191 6.0e-13 77.8 108 40.7
Eucgr.C02558 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.9e-13 77.4 109 43.1
PGR044G0279 Punica granatum HOM05D000005 ORTHO05D000012 7.9e-13 77.4 109 43.1
Eucgr.C02718 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.0e-12 77.0 109 41.3
PGR004G2233 Punica granatum HOM05D000005 ORTHO05D011459 1.0e-12 77.0 125 40.8
Eucgr.F03914 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.8e-12 76.3 108 42.6
Eucgr.K00815 Eucalyptus grandis HOM05D000005 ORTHO05D035191 2.3e-12 75.9 108 40.7
PGR044G1419 Punica granatum HOM05D000005 ORTHO05D000012 3.9e-12 75.1 109 43.1
Eucgr.C02567 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-11 72.8 109 42.2
Eucgr.C03961 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-11 72.8 109 40.4
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 2.5e-11 72.4 108 38.0
Eucgr.H02376 Eucalyptus grandis HOM05D000005 ORTHO05D191789 9.6e-11 70.5 132 36.4
PGR004G2074 Punica granatum HOM05D000005 ORTHO05D000012 9.6e-11 70.5 130 38.5
PGR044G1444 Punica granatum HOM05D000005 ORTHO05D011459 9.6e-11 70.5 94 44.7
PGR044G2498 Punica granatum HOM05D000005 ORTHO05D011459 9.6e-11 70.5 71 50.7
Eucgr.L01982 Eucalyptus grandis HOM05D000005 ORTHO05D000294 3.6e-10 68.6 61 54.1
Eucgr.F03913 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.8e-10 68.2 108 37.0
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-10 68.2 112 33.0
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-10 68.2 109 39.4
Eucgr.E01994 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.1e-09 67.0 62 50.0
PGR142G0345 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-09 66.6 109 33.9
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-09 66.6 116 36.2
PGR044G1274 Punica granatum HOM05D000005 ORTHO05D011459 2.4e-09 65.9 163 31.9
Eucgr.D01601 Eucalyptus grandis HOM05D000005 ORTHO05D011898 3.1e-09 65.5 60 53.3
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.1e-09 65.5 103 38.8
PGR142G0152 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-09 65.5 109 36.7
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-09 65.5 116 37.1
PGR142G3396 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-09 65.5 109 33.9
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 3.1e-09 65.5 112 34.8
PGR142G1545 Punica granatum HOM05D000005 ORTHO05D015109 4.0e-09 65.1 109 33.0
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 5.3e-09 64.7 116 37.1
PGR142G2081 Punica granatum HOM05D000005 ORTHO05D000012 5.3e-09 64.7 109 33.0
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-09 64.3 117 36.8
PGR102G1117 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-09 64.3 107 32.7
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-09 64.3 109 37.6
PGR142G0007 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-08 63.5 109 35.8
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-08 63.5 111 35.1
PGR142G2237 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-08 63.5 114 38.6
Eucgr.C02641 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.0e-08 62.8 118 39.0
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-08 62.8 109 33.9
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.4e-08 62.0 112 35.7
PGR142G2738 Punica granatum HOM05D000005 ORTHO05D000012 3.4e-08 62.0 109 35.8
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 3.4e-08 62.0 111 34.2
Eucgr.C03970 Eucalyptus grandis HOM05D000005 ORTHO05D194797 4.5e-08 61.6 86 40.7
Eucgr.J02084 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.5e-08 61.6 107 37.4
Eucgr.L00490 Eucalyptus grandis HOM05D000005 ORTHO05D007073 4.5e-08 61.6 62 48.4
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 4.5e-08 61.6 121 38.0
PGR142G0579 Punica granatum HOM05D000005 ORTHO05D000012 5.8e-08 61.2 113 33.6
Eucgr.B03389 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.6e-08 60.8 113 31.9
Eucgr.C03957 Eucalyptus grandis HOM05D000005 ORTHO05D193097 7.6e-08 60.8 127 37.0
PGR142G0403 Punica granatum HOM05D000005 ORTHO05D000012 7.6e-08 60.8 108 38.9
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 9.9e-08 60.5 120 35.8
Eucgr.F03887 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-07 60.1 137 35.0
Eucgr.L00496 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.3e-07 60.1 58 53.4
Ciclev10024297m.g Citrus clementina HOM05D000005 ORTHO05D000012 1.7e-07 59.7 118 39.0
Eucgr.C02551 Eucalyptus grandis HOM05D000005 ORTHO05D192855 1.7e-07 59.7 62 48.4
Eucgr.C03974 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.7e-07 59.7 69 47.8
Eucgr.K00852 Eucalyptus grandis HOM05D000005 ORTHO05D035191 1.7e-07 59.7 108 38.0
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-07 59.7 110 34.5
Eucgr.L02872 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.7e-07 59.7 69 47.8
Eucgr.L03438 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.7e-07 59.7 66 48.5
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-07 59.7 111 34.2
Eucgr.C01970 Eucalyptus grandis HOM05D000005 ORTHO05D000294 2.2e-07 59.3 78 43.6
Eucgr.F03897 Eucalyptus grandis HOM05D000005 ORTHO05D011898 2.2e-07 59.3 60 51.7
Eucgr.L01406 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-07 59.3 103 35.0
Eucgr.E01836 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.9e-07 58.9 115 33.9
RcHm_v2.0_Chr6g0251641 Rosa chinensis HOM05D000005 ORTHO05D000012 2.9e-07 58.9 109 33.9
PGR065G0002 Punica granatum HOM05D000005 ORTHO05D011459 3.8e-07 58.5 53 62.3
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 3.8e-07 58.5 115 33.0
Eucgr.L01911 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.9e-07 58.2 113 30.1
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 4.9e-07 58.2 110 32.7
Manes.05G094300 Manihot esculenta HOM05D000005 ORTHO05D000012 6.4e-07 57.8 111 30.6
PGR031G2146 Punica granatum HOM05D000005 ORTHO05D011898 6.4e-07 57.8 51 62.7
A07p30030 Brassica napus HOM05D001162 ORTHO05D001218 8.4e-07 57.4 105 30.5
BraA07t30641Z Brassica rapa HOM05D001162 ORTHO05D001218 8.4e-07 57.4 105 30.5
Eucgr.E01861 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.4e-07 57.4 115 33.9
Eucgr.H02369 Eucalyptus grandis HOM05D000005 ORTHO05D195406 8.4e-07 57.4 69 43.5
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 8.4e-07 57.4 114 35.1
arahy.Tifrunner.gnm1.ann1.8Q22UV Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-06 57.0 109 33.9
Eucgr.C02470 Eucalyptus grandis HOM05D000005 ORTHO05D000239 1.1e-06 57.0 58 48.3
PGR142G2372 Punica granatum HOM05D000005 ORTHO05D000012 1.1e-06 57.0 114 35.1
Eucgr.H03785 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.4e-06 56.6 121 31.4
Eucgr.J01296 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.4e-06 56.6 108 32.4
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-06 56.6 110 36.4
THA.LOC104812399 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 1.4e-06 56.6 112 33.0
PGR142G1047 Punica granatum HOM05D000005 ORTHO05D000012 1.9e-06 56.2 109 31.2
Ciclev10023938m.g Citrus clementina HOM05D000005 ORTHO05D000012 2.4e-06 55.8 118 34.7
Medtr8g028800 Medicago truncatula HOM05D000005 ORTHO05D000012 2.4e-06 55.8 112 33.9
QL03p067743 Quercus lobata HOM05D000005 ORTHO05D000012 2.4e-06 55.8 111 31.5
CiPaw.05G142900 Carya illinoinensis HOM05D000005 ORTHO05D000012 3.2e-06 55.5 115 28.7
Eucgr.J01303 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.2e-06 55.5 112 33.9
FAN26G1463 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.2e-06 55.5 109 32.1
PGR142G3679 Punica granatum HOM05D000005 ORTHO05D000012 3.2e-06 55.5 110 32.7
RcHm_v2.0_Chr5g0064731 Rosa chinensis HOM05D000005 ORTHO05D000012 3.2e-06 55.5 79 36.7
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 4.2e-06 55.1 112 31.2
VMungo0647G2502 Vigna mungo HOM05D000005 ORTHO05D000012 4.2e-06 55.1 115 31.3
BcaC08g45683 Brassica carinata HOM05D000005 ORTHO05D009973 5.5e-06 54.7 105 29.5
C06p34480 Brassica napus HOM05D000005 ORTHO05D009973 5.5e-06 54.7 105 29.5
Eucgr.B00007 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.5e-06 54.7 79 35.4
Eucgr.E01852 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.5e-06 54.7 115 32.2
Eucgr.J01332 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.5e-06 54.7 111 32.4
PGR044G1519 Punica granatum HOM05D000005 ORTHO05D011459 5.5e-06 54.7 64 45.3
arahy.Tifrunner.gnm1.ann1.NA6KD0 Arachis hypogaea HOM05D000011 ORTHO05D010991 7.1e-06 54.3 109 29.4
arahy.Tifrunner.gnm1.ann1.ZB8FX3 Arachis hypogaea HOM05D000011 ORTHO05D010991 7.1e-06 54.3 109 29.4
Eucgr.B02967 Eucalyptus grandis HOM05D000005 ORTHO05D194275 7.1e-06 54.3 53 49.1
Eucgr.L01460 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.1e-06 54.3 112 33.0
Glyma.06G285500 Glycine max HOM05D000005 ORTHO05D000012 7.1e-06 54.3 108 32.4
PGR142G2685 Punica granatum HOM05D000005 ORTHO05D000012 7.1e-06 54.3 114 34.2
Eucgr.E01804 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.3e-06 53.9 113 34.5
Eucgr.E02641 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.3e-06 53.9 70 40.0
Eucgr.H03738 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.3e-06 53.9 112 30.4
PGR142G3532 Punica granatum HOM05D000005 ORTHO05D011898 9.3e-06 53.9 115 30.4
QL10p026374 Quercus lobata HOM05D000005 ORTHO05D000012 9.3e-06 53.9 115 33.9
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 9.3e-06 53.9 110 30.0


User provided reference genes

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