Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.3e-55 219.5 115 100.0
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 4.3e-43 177.9 112 82.1
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 2.8e-42 175.3 113 79.6
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 3.6e-42 174.9 113 79.6
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 6.2e-42 174.1 112 80.4
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 3.1e-41 171.8 117 77.8
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 3.4e-40 168.3 115 77.4
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.4e-40 168.3 113 77.9
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 4.5e-40 167.9 112 77.7
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 4.5e-40 167.9 112 77.7
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 7.6e-40 167.2 112 77.7
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 7.6e-40 167.2 117 76.1
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.3e-39 166.4 109 79.8
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.7e-39 166.0 117 76.9
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 2.9e-39 165.2 116 75.9
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 4.9e-39 164.5 108 79.6
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 1.1e-38 163.3 116 75.9
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 1.1e-38 163.3 116 75.9
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.9e-38 162.5 114 77.2
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.9e-38 162.5 114 77.2
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.9e-38 162.5 114 77.2
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 2.4e-38 162.2 114 75.4
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 4.2e-38 161.4 109 74.3
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 7.1e-38 160.6 117 73.5
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 9.3e-38 160.2 114 75.4
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 2.1e-37 159.1 112 74.1
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.5e-37 158.3 113 76.1
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 1.3e-36 156.4 112 73.2
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.8e-36 156.0 106 75.5
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 2.3e-36 155.6 112 73.2
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 3.9e-36 154.8 106 75.5
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 3.9e-36 154.8 121 71.1
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 5.1e-36 154.5 107 74.8
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 5.1e-36 154.5 109 73.4
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 5.1e-36 154.5 112 72.3
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 8.7e-36 153.7 104 76.0
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 8.7e-36 153.7 106 75.5
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.1e-35 153.3 113 71.7
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 1.1e-35 153.3 112 71.4
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.5e-35 152.9 112 71.4
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 1.5e-35 152.9 109 72.5
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.9e-35 152.5 108 72.2
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.9e-35 152.5 106 77.4
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 1.9e-35 152.5 113 70.8
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 2.5e-35 152.1 106 73.6
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 3.3e-35 151.8 108 73.1
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 4.3e-35 151.4 112 70.5
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 5.6e-35 151.0 98 79.6
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 7.4e-35 150.6 122 68.9
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 7.4e-35 150.6 122 68.9
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 9.6e-35 150.2 106 73.6
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 9.6e-35 150.2 112 69.6
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 9.6e-35 150.2 106 73.6
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.3e-34 149.8 106 72.6
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.3e-34 149.8 104 74.0
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 2.8e-34 148.7 108 70.4
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 3.7e-34 148.3 119 69.7
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 4.8e-34 147.9 101 74.3
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.8e-34 147.9 108 70.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 6.2e-34 147.5 107 72.0
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 6.2e-34 147.5 119 68.9
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 8.1e-34 147.1 109 74.3
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 8.1e-34 147.1 109 74.3
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.1e-33 146.7 108 75.0
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.4e-33 146.4 108 74.1
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 1.8e-33 146.0 108 70.4
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 2.4e-33 145.6 112 69.6
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 2.4e-33 145.6 112 69.6
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 4.0e-33 144.8 109 69.7
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 5.3e-33 144.4 114 66.7
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 5.3e-33 144.4 118 68.6
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 5.3e-33 144.4 106 71.7
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 6.9e-33 144.1 102 76.5
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 6.9e-33 144.1 105 70.5
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 9.0e-33 143.7 107 70.1
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.5e-32 142.9 119 67.2
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 2.0e-32 142.5 103 71.8
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 2.6e-32 142.1 119 65.5
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 3.4e-32 141.7 121 65.3
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 4.5e-32 141.4 102 69.6
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 7.6e-32 140.6 122 64.8
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 7.6e-32 140.6 118 66.9
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 7.6e-32 140.6 100 71.0
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.3e-31 139.8 105 68.6
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 1.7e-31 139.4 89 75.3
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 2.9e-31 138.7 112 68.8
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 2.9e-31 138.7 105 70.5
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 3.8e-31 138.3 108 66.7
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 4.9e-31 137.9 108 72.2
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.1e-30 136.7 106 67.0
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.4e-30 136.3 107 68.2
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 2.5e-30 135.6 88 73.9
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 4.2e-30 134.8 97 71.1
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 4.2e-30 134.8 82 81.7
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.0e-28 130.2 81 77.8
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 3.9e-28 128.3 148 52.0
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 8.7e-28 127.1 82 78.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.3e-26 123.2 104 65.4
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 1.8e-25 119.4 113 62.8
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 7.2e-22 107.5 85 62.4
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 1.2e-21 106.7 87 65.5
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 1.2e-21 106.7 87 65.5
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 4.6e-21 104.8 105 52.4
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 2.5e-19 99.0 82 64.6
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.5e-19 99.0 82 64.6
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 4.3e-19 98.2 83 66.3
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 4.3e-19 98.2 85 51.8
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 5.7e-19 97.8 77 67.5
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 4.8e-18 94.7 125 45.6
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 2.9e-15 85.5 115 46.1
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 3.8e-15 85.1 79 54.4
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 8.5e-15 84.0 75 66.7
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 3.2e-14 82.0 58 69.0
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 7.2e-14 80.9 89 43.8
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 1.6e-13 79.7 58 67.2
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 3.6e-13 78.6 64 57.8
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 4.6e-13 78.2 58 63.8
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 6.1e-13 77.8 75 64.0
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 2.3e-12 75.9 81 49.4
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 2.3e-12 75.9 51 64.7
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 4.3e-11 71.6 96 47.9
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 6.3e-10 67.8 45 71.1
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 2.4e-09 65.9 57 59.6
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 1.3e-07 60.1 46 60.9
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 7.2e-06 54.3 41 61.0
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 9.4e-06 53.9 41 61.0
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 9.4e-06 53.9 41 61.0


User provided reference genes

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