Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 8.2e-277 956.4 490 100.0
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 5.3e-183 644.8 516 68.0
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 5.5e-172 608.2 537 63.7
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 8.2e-168 594.3 523 62.5
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 8.2e-168 594.3 517 64.2
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 2.4e-167 592.8 518 64.5
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 7.0e-167 591.3 521 64.1
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.0e-166 589.7 519 64.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 8.5e-165 584.3 518 62.7
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.2e-163 580.5 520 63.7
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 1.6e-163 580.1 533 61.4
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 3.6e-163 578.9 502 63.9
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.4e-162 577.0 505 63.6
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.2e-162 575.1 514 62.6
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 8.8e-162 574.3 511 62.0
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 4.8e-160 568.5 504 62.9
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 9.1e-159 564.3 510 63.3
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.6e-158 563.5 539 60.5
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 2.2e-157 559.7 518 61.6
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 2.9e-157 559.3 510 62.0
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.1e-156 557.4 515 60.4
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.2e-156 555.8 503 63.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 9.4e-156 554.3 522 60.9
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.3e-154 549.7 514 60.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.5e-153 547.0 514 60.9
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.0e-153 546.6 490 63.3
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 5.7e-153 545.0 511 62.0
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 5.7e-153 545.0 511 62.0
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 5.7e-153 545.0 513 61.6
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.7e-152 543.5 514 60.3
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.2e-152 543.1 498 63.3
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 2.2e-152 543.1 515 59.2
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 2.8e-152 542.7 515 59.0
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.3e-152 541.6 511 61.8
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 8.3e-152 541.2 515 60.4
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.8e-151 540.0 514 61.1
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.1e-151 539.3 515 58.6
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.6e-150 537.0 515 59.0
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 3.5e-150 535.8 514 61.1
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 3.8e-149 532.3 518 59.8
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 2.5e-148 529.6 517 59.2
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 8.0e-147 524.6 509 59.9
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 1.8e-146 523.5 516 57.8
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.3e-146 523.1 497 60.2
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 5.2e-146 521.9 503 58.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 6.8e-146 521.5 488 60.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 8.8e-146 521.2 523 58.9
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 4.4e-145 518.8 507 58.4
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 5.7e-145 518.5 500 58.4
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.7e-144 516.9 516 59.3
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.7e-144 515.8 514 58.8
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 7.0e-143 511.5 496 59.9
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 9.1e-143 511.1 497 58.4
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.6e-142 510.4 499 57.9
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.6e-142 510.4 515 57.9
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.6e-142 510.4 507 57.8
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.9e-141 506.1 508 58.9
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.8e-138 496.9 576 52.6
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 3.0e-138 496.1 481 59.0
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 2.6e-137 493.0 477 59.1
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 5.7e-137 491.9 512 55.9
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 7.5e-137 491.5 474 59.9
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 9.8e-137 491.1 502 58.0
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 3.2e-135 486.1 494 57.7
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 9.2e-135 484.6 465 59.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 7.8e-134 481.5 499 56.3
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 8.0e-131 471.5 529 54.6
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 8.0e-131 471.5 529 54.6
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.4e-130 470.7 500 56.0
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.7e-128 463.8 514 55.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.9e-128 462.2 510 55.1
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 8.9e-122 441.4 491 54.0
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 8.9e-122 441.4 501 54.1
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.0e-118 428.7 441 56.9
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 6.6e-117 425.2 468 53.8
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 4.3e-116 422.5 523 49.7
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 9.5e-116 421.4 502 51.6
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 8.1e-115 418.3 491 52.7
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 3.1e-114 416.4 506 51.0
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.5e-113 414.1 524 49.0
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 7.6e-113 411.8 425 59.8
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.3e-112 411.0 485 50.1
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.9e-111 407.1 409 59.2
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.7e-110 403.3 480 49.8
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 6.0e-110 402.1 455 54.9
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.0e-109 399.8 462 51.3
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 5.1e-101 372.5 511 48.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 4.8e-99 365.9 495 46.1
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 2.4e-98 363.6 352 60.5
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 6.0e-94 349.0 508 47.2
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.5e-89 334.3 522 45.0
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.2e-88 330.5 508 44.7
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.4e-87 327.0 455 44.4
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 3.3e-84 316.6 447 46.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.3e-84 316.2 305 58.7
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 2.1e-83 313.9 466 44.8
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.8e-83 312.8 327 58.4
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 6.5e-80 302.4 510 43.1
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.1e-79 301.6 532 38.7
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 7.9e-78 295.4 540 38.1
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 4.8e-75 286.2 478 42.7
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.0e-72 278.5 385 46.5
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.7e-72 277.7 289 55.0
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 4.6e-70 269.6 460 40.2
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.9e-64 250.4 243 60.1
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 1.9e-63 247.7 302 50.3
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 3.1e-58 230.3 514 34.0
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.9e-56 223.8 189 63.0
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 4.2e-47 193.4 580 29.3
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.9e-40 170.6 526 28.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 2.8e-35 154.1 154 55.2
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 4.1e-34 150.2 361 34.3
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.3e-24 117.9 90 64.4
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.4e-10 72.0 295 29.8
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 9.2e-10 69.3 72 52.8


User provided reference genes

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