Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 1.3e-201 706.1 340 100.0
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 9.5e-131 470.7 336 69.0
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.1e-118 430.6 346 63.9
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 4.6e-117 425.2 328 67.1
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 2.3e-116 422.9 331 65.9
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 3.9e-116 422.2 325 64.6
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 8.6e-116 421.0 344 63.1
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.6e-114 416.8 324 65.4
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.8e-114 416.0 305 68.2
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 2.8e-114 416.0 351 63.5
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.1e-113 414.1 335 62.7
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.1e-113 414.1 334 65.6
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.4e-113 413.7 335 62.4
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.4e-112 408.7 329 62.3
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.3e-111 407.1 324 63.9
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.4e-110 403.7 293 68.3
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 1.9e-110 403.3 314 64.0
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 2.4e-110 402.9 293 68.3
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.2e-109 400.6 284 70.4
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 2.1e-109 399.8 217 84.8
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.1e-109 399.8 318 63.2
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 4.6e-109 398.7 244 77.0
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 6.0e-109 398.3 275 70.5
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 7.8e-109 397.9 300 68.0
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.7e-108 396.7 246 76.8
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 1.7e-108 396.7 285 66.7
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 3.3e-107 392.5 281 68.3
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 9.6e-107 391.0 339 60.2
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.3e-106 390.6 237 79.7
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 2.8e-106 389.4 237 79.3
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.8e-106 389.4 237 79.7
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 8.1e-106 387.9 237 80.2
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.4e-105 387.1 298 64.4
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.4e-105 387.1 271 69.7
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.8e-105 386.7 271 69.7
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.8e-105 386.7 271 69.7
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 1.8e-105 386.7 242 75.2
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 3.1e-105 386.0 353 59.5
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 9.0e-105 384.4 319 60.8
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 9.0e-105 384.4 209 85.2
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 1.5e-104 383.6 226 78.8
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 2.6e-104 382.9 274 69.0
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 4.4e-104 382.1 302 63.2
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 5.8e-104 381.7 314 61.8
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 7.6e-104 381.3 314 61.5
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 2.9e-103 379.4 269 68.8
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 3.8e-103 379.0 250 74.8
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 3.8e-103 379.0 304 63.5
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 3.8e-103 379.0 243 76.5
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 3.8e-103 379.0 279 67.7
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 6.4e-103 378.3 249 74.7
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 8.4e-103 377.9 344 57.6
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 8.4e-103 377.9 238 75.2
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.1e-102 377.5 271 69.0
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 2.4e-102 376.3 319 60.2
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 7.1e-102 374.8 232 76.7
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 9.3e-102 374.4 333 57.7
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 1.2e-101 374.0 216 81.0
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.2e-101 374.0 228 77.6
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.6e-101 373.6 281 65.5
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.7e-101 372.9 302 62.9
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 3.5e-101 372.5 201 84.6
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 4.6e-101 372.1 242 73.1
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 6.0e-101 371.7 324 57.7
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.0e-100 370.9 298 62.8
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 1.7e-100 370.2 241 73.0
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 1.7e-100 370.2 276 67.8
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 3.9e-100 369.0 355 55.2
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.9e-100 369.0 272 69.5
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 3.9e-100 369.0 279 64.2
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.9e-100 369.0 305 62.0
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 6.6e-100 368.2 200 83.5
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 6.6e-100 368.2 293 61.1
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 6.6e-100 368.2 331 57.7
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 8.7e-100 367.9 238 71.8
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 8.7e-100 367.9 293 62.5
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 1.5e-99 367.1 313 58.5
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 1.5e-99 367.1 313 58.5
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.9e-99 366.7 311 62.7
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 2.5e-99 366.3 267 66.3
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 4.3e-99 365.5 314 58.6
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 4.3e-99 365.5 275 66.2
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 9.6e-99 364.4 273 64.1
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 9.6e-99 364.4 273 64.1
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 9.6e-99 364.4 294 61.9
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 1.3e-98 364.0 248 72.2
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 1.6e-98 363.6 273 63.7
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 1.6e-98 363.6 221 76.0
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 2.1e-98 363.2 216 77.3
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 2.8e-98 362.8 274 63.5
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 3.6e-98 362.5 274 63.9
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 4.8e-98 362.1 271 66.4
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 6.2e-98 361.7 213 78.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.4e-97 360.5 216 77.3
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 2.4e-97 359.8 287 62.0
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 2.4e-97 359.8 287 62.0
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 3.1e-97 359.4 276 63.4
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 4.0e-97 359.0 276 63.8
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 4.0e-97 359.0 288 63.9
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 5.3e-97 358.6 206 80.1
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 5.3e-97 358.6 271 65.3
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 6.9e-97 358.2 205 78.5
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.2e-96 357.5 288 61.5
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 4.5e-96 355.5 195 83.1
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 2.9e-95 352.8 409 50.4
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 3.8e-95 352.4 206 76.2
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 8.4e-95 351.3 210 77.6
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 5.4e-94 348.6 276 62.7
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 7.1e-94 348.2 284 61.3
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 8.7e-92 341.3 277 60.6
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.1e-91 340.9 223 71.3
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.1e-91 340.9 223 71.7
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.3e-90 337.4 208 73.6
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.6e-90 337.0 278 60.1
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 7.6e-88 328.2 328 54.9
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.7e-87 327.0 228 64.9
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 3.0e-84 316.2 211 69.7
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 8.4e-79 298.1 277 58.8
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.9e-78 297.0 219 61.2
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.3e-76 290.8 249 61.0
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.2e-74 283.5 162 79.6
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.1e-73 281.2 162 74.7
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 5.9e-72 275.4 160 77.5
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 1.9e-70 270.4 261 49.0
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.9e-70 270.4 202 61.9
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 7.9e-69 265.0 151 77.5
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 4.3e-67 259.2 138 85.5
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 6.3e-66 255.4 145 80.0
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 6.1e-61 238.8 208 53.8
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 1.3e-55 221.1 122 77.9
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 3.7e-50 203.0 152 64.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.8e-44 184.1 156 58.3
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 5.7e-43 179.1 172 48.3
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.9e-30 137.5 118 54.2
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 2.3e-23 114.0 83 57.8
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 4.7e-21 106.3 196 40.3
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 8.0e-21 105.5 99 56.6
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 5.8e-19 99.4 66 75.8
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.2e-16 91.7 115 52.2
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 6.0e-16 89.4 117 48.7
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.0e-15 86.3 70 61.4
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.1e-14 85.1 57 73.7
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 6.8e-12 75.9 89 47.2
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 8.9e-12 75.5 87 52.9


User provided reference genes

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