Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 2.0e-89 332.4 171 100.0
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.7e-56 223.0 168 65.5
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.7e-54 214.9 157 66.2
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 3.1e-53 212.2 165 61.8
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.0e-52 209.5 164 64.0
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 2.6e-52 209.1 155 64.5
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.6e-52 209.1 162 62.3
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 3.4e-52 208.8 158 64.6
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.4e-52 208.8 155 65.2
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 5.8e-52 208.0 152 66.4
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 7.6e-52 207.6 150 66.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 7.6e-52 207.6 161 62.7
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.3e-51 206.8 149 65.8
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 2.2e-51 206.1 149 65.8
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.9e-51 205.7 171 59.6
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.9e-51 205.7 171 59.6
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.9e-51 205.7 171 59.6
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 3.7e-51 205.3 150 66.0
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 8.3e-51 204.1 160 61.2
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-50 203.8 155 65.2
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.1e-50 203.8 152 65.1
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.9e-50 203.0 152 63.8
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.4e-50 201.4 171 59.1
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 5.4e-50 201.4 172 62.8
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 5.4e-50 201.4 149 65.1
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 5.4e-50 201.4 149 65.1
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 7.1e-50 201.1 163 63.2
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 7.1e-50 201.1 164 61.6
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 9.2e-50 200.7 149 65.1
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 9.2e-50 200.7 160 63.8
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 1.2e-49 200.3 166 61.4
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.7e-49 199.1 149 65.1
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.5e-49 198.7 151 64.9
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 3.5e-49 198.7 151 60.9
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 1.3e-48 196.8 150 62.7
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.3e-48 196.8 168 59.5
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.7e-48 196.4 152 62.5
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 2.3e-48 196.1 163 60.1
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 3.9e-48 195.3 150 63.3
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 3.9e-48 195.3 168 58.9
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 5.1e-48 194.9 168 58.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 8.6e-48 194.1 151 62.9
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.5e-47 193.4 167 59.3
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 1.9e-47 193.0 152 59.2
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 4.3e-47 191.8 153 59.5
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 4.3e-47 191.8 153 59.5
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.6e-46 189.9 153 59.5
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.6e-46 189.9 147 59.9
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.8e-45 186.4 152 59.2
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 3.1e-45 185.7 152 57.2
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.1e-45 185.7 160 56.9
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 4.0e-45 185.3 154 62.3
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 5.2e-45 184.9 149 63.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 5.2e-45 184.9 132 65.2
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 8.9e-45 184.1 153 58.8
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 2.0e-44 183.0 133 66.9
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 3.4e-44 182.2 150 59.3
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.3e-43 180.3 152 58.6
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 8.4e-43 177.6 237 43.0
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.1e-42 177.2 153 59.5
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 2.4e-42 176.0 139 60.4
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 4.2e-42 175.3 142 60.6
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 5.4e-42 174.9 149 57.0
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 7.1e-42 174.5 164 52.4
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 2.1e-41 172.9 175 50.9
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 2.1e-41 172.9 152 55.3
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 4.6e-41 171.8 153 54.9
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 4.6e-41 171.8 147 56.5
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.7e-40 169.9 150 55.3
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.3e-40 169.5 168 53.0
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 3.9e-40 168.7 167 55.7
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 3.9e-40 168.7 132 62.1
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 5.1e-40 168.3 144 55.6
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.1e-39 167.2 166 50.0
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.5e-39 166.8 140 57.9
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-39 166.8 130 59.2
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 2.5e-39 166.0 137 56.9
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 3.3e-39 165.6 158 57.6
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 4.3e-39 165.2 137 56.2
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 5.6e-39 164.9 203 46.3
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 8.1e-38 161.0 138 60.1
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.0e-36 156.4 134 59.0
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.9e-35 151.8 176 46.0
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 3.2e-34 149.1 128 59.4
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.6e-33 146.7 115 61.7
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 2.1e-33 146.4 105 65.7
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 2.7e-33 146.0 170 48.8
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 4.6e-33 145.2 153 48.4
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 7.3e-31 137.9 138 52.9
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.4e-29 132.9 155 52.3
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.5e-23 112.8 84 70.2
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 1.3e-22 110.5 91 56.0
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 4.8e-22 108.6 80 68.8
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 6.2e-22 108.2 83 63.9
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 8.1e-22 107.8 88 54.5
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 1.8e-21 106.7 100 46.0
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.9e-21 104.8 155 45.2
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 6.9e-21 104.8 77 70.1
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 9.0e-21 104.4 85 55.3
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 9.0e-21 104.4 92 60.9
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.4e-20 102.4 75 60.0
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 1.0e-19 100.9 150 40.0
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 1.3e-19 100.5 147 41.5
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 1.1e-18 97.4 139 41.0
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 2.7e-17 92.8 92 56.5
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.3e-15 85.9 83 56.6
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.1e-13 79.0 107 39.3
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 5.8e-12 75.1 83 44.6
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.9e-10 70.1 60 65.0
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 3.3e-07 59.3 43 67.4
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 4.8e-06 55.5 43 65.1


User provided reference genes

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