Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 0.0e+00 1361.7 791 100.0
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.9e-182 643.7 718 59.3
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.6e-174 615.5 723 56.6
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 4.7e-173 612.5 710 58.5
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 4.4e-171 605.9 711 57.9
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 9.8e-171 604.7 708 58.8
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.1e-169 601.3 713 58.1
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.1e-169 601.3 854 50.9
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.4e-169 600.1 709 58.0
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 4.6e-168 595.9 733 55.3
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 2.8e-165 586.6 710 56.6
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 2.3e-164 583.6 712 56.6
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.3e-164 583.6 798 43.6
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.7e-160 570.1 722 55.5
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.6e-160 569.3 722 55.0
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.3e-159 567.8 714 55.6
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 3.0e-159 566.6 715 54.8
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 6.6e-159 565.5 716 56.3
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 1.6e-157 560.8 679 57.7
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.1e-156 558.1 656 58.8
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.4e-155 553.1 786 51.7
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 7.5e-155 552.0 707 55.4
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.9e-154 549.3 717 52.6
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.8e-152 542.0 780 51.5
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 1.7e-151 540.8 710 52.7
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 2.5e-150 537.0 724 52.9
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.4e-148 531.2 711 52.0
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 2.2e-146 523.9 707 51.9
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.4e-145 521.2 715 51.7
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 9.2e-145 518.5 734 52.2
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.5e-142 510.4 632 46.8
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.8e-141 506.9 758 48.3
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 6.2e-141 505.8 626 57.2
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.0e-140 503.1 835 47.5
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 4.9e-138 496.1 805 47.0
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 6.4e-138 495.7 640 55.8
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 8.4e-138 495.4 660 51.7
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 7.1e-137 492.3 729 51.2
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 2.3e-135 487.3 729 51.0
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 3.9e-135 486.5 728 49.5
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 6.6e-135 485.7 639 54.9
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 8.7e-135 485.3 725 50.3
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.3e-133 481.5 719 50.8
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 3.6e-133 479.9 705 49.9
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 8.1e-133 478.8 716 50.4
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 6.9e-132 475.7 730 50.3
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.5e-131 473.0 778 45.0
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 3.8e-130 469.9 720 48.5
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 6.4e-130 469.2 703 47.9
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 8.4e-130 468.8 721 48.5
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 1.1e-129 468.4 723 49.2
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 4.2e-129 466.5 720 48.1
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.7e-128 463.8 719 50.3
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 8.7e-127 458.8 723 48.7
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 2.1e-125 454.1 723 48.5
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.1e-125 454.1 674 48.5
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 3.7e-125 453.4 726 47.7
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.5e-123 448.0 736 47.3
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 3.8e-122 443.4 730 47.7
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 5.1e-119 433.0 748 45.3
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 6.7e-119 432.6 716 49.6
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.9e-118 431.0 693 48.8
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 2.5e-118 430.6 711 47.5
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 4.3e-118 429.9 744 45.8
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 5.7e-118 429.5 706 47.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 3.7e-117 426.8 709 47.4
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.8e-116 424.5 707 48.1
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 2.4e-116 424.1 697 39.5
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 3.4e-115 420.2 708 48.0
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 8.4e-114 415.6 556 56.3
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.4e-113 414.8 643 42.3
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 3.2e-113 413.7 734 46.9
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 9.3e-113 412.1 670 48.5
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 3.0e-111 407.1 723 46.1
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 5.1e-111 406.4 638 49.5
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 6.7e-111 406.0 475 48.4
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 5.7e-110 402.9 729 45.0
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.8e-109 400.6 648 48.1
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 9.0e-108 395.6 705 43.3
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 4.3e-102 376.7 573 51.3
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 2.9e-98 364.0 476 44.5
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 6.1e-96 356.3 650 44.5
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.8e-84 318.2 587 46.5
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 2.4e-84 317.8 600 35.7
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.3e-82 312.0 546 46.7
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 5.0e-82 310.1 582 45.7
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 5.7e-78 296.6 696 40.5
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 9.8e-78 295.8 719 34.8
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 5.5e-73 280.0 701 38.4
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 1.3e-66 258.8 440 51.1
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.7e-61 241.9 235 51.5
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.8e-54 216.9 452 48.9
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 4.3e-49 200.7 342 39.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 9.5e-49 199.5 508 30.5
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 3.1e-47 194.5 197 52.8
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 7.5e-46 189.9 417 48.4
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 2.1e-43 181.8 467 31.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 1.6e-40 172.2 641 28.7
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.8e-39 168.7 175 50.9
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 9.9e-30 136.3 199 42.7
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.9e-25 122.1 212 37.3
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 4.0e-23 114.4 423 29.1
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 8.4e-21 106.7 269 34.2
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.4e-20 105.1 231 37.2
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 7.9e-19 100.1 136 47.1
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.7e-18 99.0 79 67.1
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.1e-15 89.7 256 32.0
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.3e-15 87.4 47 80.9
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 9.9e-14 83.2 114 43.0
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 4.2e-12 77.8 81 46.9
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 6.7e-10 70.5 52 61.5
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 5.6e-09 67.4 86 46.5


User provided reference genes

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