Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 6.3e-251 870.5 516 100.0
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 3.0e-160 569.3 412 73.8
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 3.0e-160 569.3 429 70.4
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.1e-159 567.4 474 65.6
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 9.9e-156 554.3 470 64.7
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 2.9e-155 552.7 429 69.0
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 3.8e-155 552.4 419 71.4
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 3.8e-155 552.4 402 72.1
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 3.8e-155 552.4 414 69.1
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.9e-154 550.1 427 69.1
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 3.2e-154 549.3 414 68.8
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 3.2e-154 549.3 405 71.6
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 2.1e-153 546.6 410 70.0
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 1.0e-152 544.3 434 68.4
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 8.7e-152 541.2 414 70.5
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 1.3e-150 537.3 410 69.3
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.3e-150 537.3 431 68.7
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.1e-150 534.6 523 63.5
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 6.9e-149 531.6 531 61.2
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 9.0e-149 531.2 410 68.3
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.5e-148 530.4 531 61.0
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 5.8e-148 528.5 415 68.0
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 4.9e-147 525.4 420 66.9
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.1e-146 524.2 408 68.4
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 3.2e-146 522.7 430 64.9
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.3e-144 517.3 419 64.9
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.3e-144 517.3 431 64.7
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 5.1e-144 515.4 431 64.7
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.1e-143 514.2 425 63.8
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 5.6e-143 511.9 436 64.4
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 5.6e-143 511.9 415 66.0
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.3e-142 510.8 431 64.5
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 1.6e-142 510.4 534 58.2
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 1.6e-142 510.4 431 63.8
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.7e-142 509.2 415 65.5
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 8.2e-142 508.1 482 59.5
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 1.8e-141 506.9 431 64.7
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 2.4e-141 506.5 431 65.0
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 3.1e-141 506.1 435 64.6
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 9.0e-141 504.6 411 65.5
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.5e-140 503.8 431 62.6
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 3.4e-140 502.7 432 63.7
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 2.2e-139 500.0 430 63.0
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 2.9e-139 499.6 416 66.3
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 3.8e-139 499.2 431 62.4
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 3.8e-139 499.2 524 56.7
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 3.8e-139 499.2 424 63.7
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 4.9e-139 498.8 411 65.5
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.9e-138 496.9 453 60.9
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 1.9e-138 496.9 409 64.5
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 2.5e-138 496.5 436 62.8
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 3.2e-138 496.1 523 57.4
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 2.1e-137 493.4 529 56.0
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.7e-137 493.0 453 60.7
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 3.5e-137 492.7 526 57.6
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 3.5e-137 492.7 524 55.3
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 4.6e-137 492.3 409 64.3
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.0e-136 491.1 523 55.1
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 1.3e-136 490.7 412 64.6
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 5.1e-136 488.8 393 67.2
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 5.1e-136 488.8 429 63.2
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 6.7e-136 488.4 521 57.4
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.1e-135 487.6 530 57.5
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.9e-135 486.9 411 64.2
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.8e-134 482.3 411 63.5
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 1.1e-133 481.1 431 61.9
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.1e-133 481.1 430 62.1
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 6.9e-133 478.4 411 62.5
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 6.9e-133 478.4 417 62.1
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 3.8e-131 472.6 430 61.2
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 8.5e-131 471.5 418 63.4
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 8.5e-131 471.5 428 59.3
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 1.6e-129 467.2 528 56.6
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 3.6e-129 466.1 418 63.9
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 1.8e-128 463.8 390 63.8
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 3.9e-128 462.6 433 60.5
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 5.1e-128 462.2 424 62.3
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 1.1e-127 461.1 524 54.4
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.5e-127 460.7 524 54.2
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.5e-127 460.7 524 54.2
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.0e-127 460.3 427 58.8
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 3.3e-127 459.5 412 60.0
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 5.7e-127 458.8 415 62.7
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 9.7e-127 458.0 528 55.5
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 1.3e-126 457.6 432 61.1
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 8.2e-126 454.9 415 61.4
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.1e-125 454.5 521 54.7
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 1.1e-125 454.5 522 53.6
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 1.4e-125 454.1 426 59.2
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.8e-125 453.8 428 60.0
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 2.4e-125 453.4 406 60.8
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 4.1e-125 452.6 433 59.6
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 6.9e-125 451.8 489 55.8
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.5e-124 450.7 408 58.3
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 5.9e-124 448.7 544 52.2
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.3e-123 447.6 520 52.9
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.3e-123 447.6 439 58.8
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 3.2e-122 443.0 397 62.7
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 3.2e-122 443.0 422 58.8
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 3.6e-121 439.5 530 51.9
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 3.6e-121 439.5 530 51.9
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 6.1e-121 438.7 390 60.0
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 7.9e-121 438.3 401 60.3
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.0e-120 436.4 517 56.9
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 7.7e-116 421.8 428 55.6
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 8.5e-115 418.3 397 61.0
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 2.6e-111 406.8 413 57.9
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.0e-107 394.8 307 68.4
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 2.9e-107 393.3 383 56.1
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 3.0e-104 383.3 360 58.6
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 1.2e-95 354.8 446 47.5
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 6.3e-94 349.0 316 57.9
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 6.6e-91 339.0 429 46.2
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.8e-88 330.9 372 53.5
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 1.7e-86 324.3 435 44.4
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.0e-83 315.1 275 61.5
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 2.9e-83 313.5 275 61.1
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 8.6e-83 312.0 427 42.6
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.9e-82 310.8 288 56.9
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 2.3e-75 287.3 209 72.2
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.4e-72 278.1 273 58.2
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.8e-72 277.7 233 60.5
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 6.8e-72 275.8 412 41.5
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 2.0e-71 274.2 306 52.0
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.2e-65 252.7 274 55.8
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.5e-58 230.7 267 55.1
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 6.2e-57 226.1 520 34.0
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 3.4e-55 220.3 177 66.7
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.6e-47 194.1 158 63.9
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 7.8e-44 182.6 402 35.3
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 1.6e-41 174.9 143 65.7
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.4e-40 171.8 159 62.3
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 1.2e-39 168.7 119 76.5
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 3.4e-31 140.6 106 67.9
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.2e-28 132.1 150 52.0
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 2.3e-27 127.9 107 67.3
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 2.3e-27 127.9 107 67.3
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.3e-25 122.1 126 55.6
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 6.1e-20 103.2 150 44.0
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 4.8e-17 93.6 86 61.6
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 1.5e-15 88.6 95 53.7
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 7.7e-15 86.3 70 70.0
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.3e-14 85.5 94 54.3
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 6.5e-14 83.2 57 66.7
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.4e-13 82.0 74 60.8
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 2.5e-13 81.3 76 59.2
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 6.1e-12 76.6 108 43.5
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.9e-11 73.9 154 37.7
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.1e-10 72.4 88 48.9
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 1.3e-09 68.9 235 29.8
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 9.1e-08 62.8 153 34.0
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.4e-07 60.8 148 34.5
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 6.5e-06 56.6 188 26.6


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