Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 3.7e-65 251.9 182 100.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 5.4e-48 194.9 129 79.8
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.7e-47 192.6 129 80.6
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 1.6e-44 183.3 127 78.7
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 2.8e-44 182.6 129 78.3
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 4.7e-44 181.8 129 78.3
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.8e-43 179.9 130 77.7
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.8e-43 179.9 130 77.7
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.8e-43 179.9 130 77.7
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.8e-43 179.9 127 77.2
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 8.9e-43 177.6 127 76.4
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.2e-42 177.2 129 76.0
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 1.2e-42 177.2 129 75.2
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 2.0e-42 176.4 129 73.6
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.0e-42 176.4 129 73.6
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 3.4e-42 175.6 129 73.6
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 5.8e-42 174.9 132 74.2
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 5.8e-42 174.9 133 72.2
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 9.8e-42 174.1 132 74.2
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.3e-41 173.7 130 73.8
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.3e-41 173.7 135 74.1
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.7e-41 173.3 128 73.4
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.7e-41 173.3 129 74.4
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.2e-41 172.9 129 73.6
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.9e-41 172.6 135 70.4
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.9e-41 172.6 127 74.0
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 3.7e-41 172.2 130 73.1
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 4.9e-41 171.8 122 76.2
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 4.9e-41 171.8 116 76.7
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 8.3e-41 171.0 129 72.9
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 1.9e-40 169.9 134 70.9
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 3.2e-40 169.1 125 73.6
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 4.1e-40 168.7 132 72.7
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 5.4e-40 168.3 125 70.4
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 1.6e-39 166.8 127 72.4
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.7e-39 166.0 127 68.5
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.3e-38 163.7 133 66.9
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.3e-38 163.7 122 74.6
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.7e-38 163.3 133 67.7
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 2.3e-38 162.9 128 69.5
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.0e-38 162.5 130 68.5
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 8.6e-38 161.0 127 70.9
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.1e-37 160.6 134 64.2
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 2.5e-37 159.5 129 65.9
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 4.3e-37 158.7 127 67.7
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 4.3e-37 158.7 132 68.2
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 4.3e-37 158.7 118 74.6
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 4.3e-37 158.7 121 74.4
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 5.6e-37 158.3 132 68.9
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 5.6e-37 158.3 122 72.1
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 7.3e-37 157.9 118 74.6
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 7.3e-37 157.9 130 70.0
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.2e-36 157.1 127 68.5
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.2e-36 157.1 127 68.5
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.2e-36 157.1 127 68.5
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.2e-36 157.1 118 73.7
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 1.2e-36 157.1 169 56.8
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.2e-36 157.1 132 68.2
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.2e-36 157.1 117 73.5
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.2e-36 157.1 117 73.5
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.6e-36 156.8 129 69.0
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.6e-36 156.8 129 65.1
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 2.8e-36 156.0 133 65.4
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 3.6e-36 155.6 130 65.4
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 3.6e-36 155.6 129 64.3
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.6e-36 155.6 127 67.7
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.7e-36 155.2 131 67.9
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 4.7e-36 155.2 130 64.6
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 4.7e-36 155.2 130 64.6
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 4.7e-36 155.2 130 64.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 4.7e-36 155.2 117 72.6
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.2e-36 154.8 132 65.9
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 8.1e-36 154.5 137 67.2
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.1e-35 154.1 130 65.4
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.1e-35 154.1 123 74.0
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.1e-35 154.1 129 69.0
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 1.4e-35 153.7 126 65.9
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.4e-35 153.7 125 66.4
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.4e-35 153.7 122 68.9
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.8e-35 153.3 124 70.2
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 1.8e-35 153.3 121 72.7
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 4.0e-35 152.1 123 73.2
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 5.2e-35 151.8 183 51.9
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.2e-34 150.6 131 66.4
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 3.4e-34 149.1 131 66.4
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 3.4e-34 149.1 125 68.8
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 4.4e-34 148.7 123 67.5
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 5.8e-34 148.3 129 62.0
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.2e-33 146.4 121 70.2
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 1.1e-32 144.1 121 69.4
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.9e-32 143.3 122 63.9
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.9e-32 143.3 184 50.0
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 3.2e-32 142.5 130 62.3
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 3.2e-32 142.5 130 62.3
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.2e-32 142.5 115 67.0
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 4.1e-32 142.1 122 62.3
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 7.1e-32 141.4 130 62.3
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.2e-31 140.6 125 67.2
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.6e-31 140.2 118 66.1
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 3.5e-31 139.0 112 68.8
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 6.0e-31 138.3 129 65.9
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 3.0e-30 136.0 127 66.1
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 6.6e-30 134.8 111 70.3
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 8.6e-30 134.4 158 53.8
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.1e-29 134.0 132 62.9
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.5e-29 132.9 117 65.0
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 7.3e-29 131.3 122 59.8
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.2e-28 130.6 128 64.1
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.2e-28 130.6 110 66.4
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 2.1e-28 129.8 116 63.8
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.1e-28 129.8 78 85.9
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 8.1e-28 127.9 98 70.4
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 3.1e-27 125.9 106 67.9
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 4.0e-27 125.6 100 70.0
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 8.4e-25 117.9 135 53.3
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 8.4e-25 117.9 154 48.7
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 1.1e-24 117.5 115 60.0
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.0e-22 110.9 75 80.0
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.9e-22 109.0 117 50.4
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 5.1e-22 108.6 122 56.6
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 9.6e-21 104.4 90 62.2
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.6e-20 103.6 81 69.1
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.0e-18 96.7 255 33.3
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.7e-15 86.3 80 62.5
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 6.0e-15 85.1 85 60.0
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 3.6e-12 75.9 108 46.3
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 4.8e-12 75.5 135 45.2
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.4e-11 73.9 56 69.6
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.1e-08 64.3 42 81.0
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 7.9e-07 58.2 67 47.8
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 5.1e-06 55.5 84 45.2


User provided reference genes

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