Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 1.5e-30 135.6 72 100.0
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.1e-20 102.8 72 69.4
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 7.1e-20 100.1 67 71.6
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 1.2e-19 99.4 67 74.6
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 1.2e-19 99.4 71 67.6
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.6e-19 99.0 67 73.1
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 2.7e-19 98.2 67 70.1
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 7.9e-19 96.7 67 68.7
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 1.0e-18 96.3 72 65.3
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 1.0e-18 96.3 72 65.3
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 1.3e-18 95.9 72 66.7
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 3.0e-18 94.7 72 63.9
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 5.1e-18 94.0 68 69.1
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 8.7e-18 93.2 68 64.7
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.1e-17 92.8 69 65.2
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.1e-17 92.8 64 70.3
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 1.1e-17 92.8 66 69.7
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 1.5e-17 92.4 67 67.2
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.5e-17 92.4 68 67.6
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 1.5e-17 92.4 68 69.1
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 1.5e-17 92.4 64 71.9
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.9e-17 92.0 66 66.7
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 1.9e-17 92.0 68 66.2
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 1.9e-17 92.0 67 68.7
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 2.5e-17 91.7 67 70.1
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 3.3e-17 91.3 72 63.9
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 5.7e-17 90.5 66 66.7
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 5.7e-17 90.5 70 62.9
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 7.4e-17 90.1 68 63.2
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 7.4e-17 90.1 68 61.8
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 9.7e-17 89.7 68 66.2
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 1.3e-16 89.4 68 64.7
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 2.2e-16 88.6 65 64.6
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 2.8e-16 88.2 66 66.7
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 3.7e-16 87.8 67 64.2
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 3.7e-16 87.8 66 63.6
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 3.7e-16 87.8 69 62.3
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 3.7e-16 87.8 72 61.1
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.7e-16 87.8 64 65.6
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 3.7e-16 87.8 68 66.2
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 4.8e-16 87.4 66 62.1
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 6.3e-16 87.0 66 62.1
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 6.3e-16 87.0 66 62.1
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 6.3e-16 87.0 67 62.7
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 6.3e-16 87.0 66 63.6
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 1.1e-15 86.3 66 62.1
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.1e-15 86.3 65 63.1
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 1.4e-15 85.9 65 63.1
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.4e-15 85.9 65 61.5
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.4e-15 85.9 65 63.1
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.8e-15 85.5 65 63.1
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 2.4e-15 85.1 64 62.5
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 2.4e-15 85.1 66 63.6
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 4.1e-15 84.3 66 60.6
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 4.1e-15 84.3 67 59.7
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 4.1e-15 84.3 66 60.6
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 4.1e-15 84.3 66 60.6
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 4.1e-15 84.3 66 60.6
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 4.1e-15 84.3 64 60.9
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 5.3e-15 84.0 66 57.6
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 5.3e-15 84.0 67 62.7
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 1.2e-14 82.8 66 60.6
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 1.2e-14 82.8 68 57.4
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.2e-14 82.8 61 63.9
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 2.0e-14 82.0 66 63.6
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 2.0e-14 82.0 65 58.5
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 2.6e-14 81.6 62 62.9
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 2.6e-14 81.6 62 62.9
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 3.4e-14 81.3 88 54.5
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 4.5e-14 80.9 65 56.9
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 4.5e-14 80.9 67 59.7
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 7.7e-14 80.1 65 55.4
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.0e-13 79.7 66 54.5
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 1.3e-13 79.3 65 55.4
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 1.3e-13 79.3 61 59.0
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 1.3e-13 79.3 61 59.0
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 1.3e-13 79.3 61 59.0
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 1.3e-13 79.3 61 59.0
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 2.2e-13 78.6 66 54.5
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 5.0e-13 77.4 67 52.2
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 1.1e-12 76.3 61 62.3
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 1.4e-12 75.9 67 49.3
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 1.9e-12 75.5 67 50.7
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 2.5e-12 75.1 67 49.3
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 5.5e-12 73.9 46 73.9
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 9.4e-12 73.2 69 49.3
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 3.6e-11 71.2 68 55.9
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 4.6e-11 70.9 62 56.5
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 4.6e-11 70.9 59 61.0
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 7.9e-11 70.1 42 78.6
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 2.3e-10 68.6 67 50.7
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 1.1e-09 66.2 57 59.6
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 7.4e-09 63.5 60 50.0
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 2.2e-08 62.0 69 49.3
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 4.8e-08 60.8 42 71.4
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 4.1e-07 57.8 42 66.7
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 5.3e-07 57.4 42 64.3
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 1.5e-06 55.8 40 67.5
Zm00001eb077870 Zea mays HOM05D007530 ORTHO05D009556 2.0e-06 55.5 37 67.6
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 2.6e-06 55.1 42 57.1


User provided reference genes

Program Settings