Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 1.3e-91 339.7 177 100.0
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 4.3e-42 175.3 168 64.9
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 4.3e-42 175.3 162 65.4
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 1.5e-39 166.8 160 59.4
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 2.9e-38 162.5 163 61.3
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 4.9e-38 161.8 172 55.8
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 1.9e-37 159.8 170 54.7
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 4.2e-37 158.7 171 54.4
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 2.1e-36 156.4 169 58.0
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 6.0e-36 154.8 168 58.3
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 7.9e-36 154.5 162 57.4
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 7.9e-36 154.5 167 58.1
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.3e-35 153.7 162 56.8
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 3.0e-35 152.5 180 54.4
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 3.9e-35 152.1 155 57.4
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 3.9e-35 152.1 155 60.0
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 5.1e-35 151.8 162 56.2
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 1.5e-34 150.2 163 54.0
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 3.3e-34 149.1 157 58.0
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 5.6e-34 148.3 179 53.6
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 1.3e-33 147.1 160 58.1
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 1.6e-33 146.7 197 51.3
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.1e-33 146.4 167 52.1
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 3.6e-33 145.6 161 55.3
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 3.6e-33 145.6 165 54.5
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 4.8e-33 145.2 166 51.8
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 1.1e-32 144.1 160 54.4
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 1.1e-32 144.1 154 56.5
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.1e-32 144.1 158 53.8
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 1.4e-32 143.7 154 55.8
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.8e-32 143.3 163 54.0
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 3.1e-32 142.5 159 52.8
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 4.5e-31 138.7 171 49.7
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 7.6e-31 137.9 149 59.1
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 4.9e-30 135.2 173 49.1
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 6.4e-30 134.8 164 51.2
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 6.4e-30 134.8 162 52.5
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 6.4e-30 134.8 181 50.8
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 1.9e-29 133.3 163 49.7
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 1.9e-29 133.3 157 52.9
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 9.3e-29 131.0 181 48.1
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 9.3e-29 131.0 160 51.9
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 9.3e-29 131.0 169 49.7
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.2e-28 130.6 169 49.1
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 1.6e-28 130.2 161 54.7
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 3.5e-28 129.0 162 48.8
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 6.0e-28 128.3 158 47.5
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 1.0e-27 127.5 155 48.4
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 1.0e-27 127.5 155 48.4
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 1.0e-27 127.5 162 48.1
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 1.3e-27 127.1 161 46.6
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 1.3e-27 127.1 181 47.5
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 3.9e-27 125.6 181 48.1
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.9e-27 125.6 182 47.8
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 6.7e-27 124.8 169 49.1
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 6.7e-27 124.8 151 48.3
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 1.5e-26 123.6 158 48.7
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 4.3e-26 122.1 114 63.2
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 5.6e-26 121.7 165 46.1
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 5.6e-26 121.7 183 44.8
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 7.4e-26 121.3 164 48.2
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 7.4e-26 121.3 185 46.5
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.3e-25 120.6 155 47.1
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 1.3e-25 120.6 104 62.5
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 1.3e-25 120.6 165 49.1
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.1e-25 119.8 186 43.0
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 6.2e-25 118.2 159 44.7
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 6.2e-25 118.2 176 43.8
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 8.1e-25 117.9 159 45.3
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 8.1e-25 117.9 153 48.4
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.4e-24 117.1 186 43.0
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 2.4e-24 116.3 162 45.7
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 2.4e-24 116.3 117 59.8
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 4.0e-24 115.5 79 72.2
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 5.3e-24 115.2 110 61.8
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 9.0e-24 114.4 156 45.5
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 9.0e-24 114.4 159 47.8
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 1.2e-23 114.0 163 44.8
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 3.4e-23 112.5 166 44.0
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 3.4e-23 112.5 158 47.5
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 1.7e-22 110.2 146 47.9
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 1.7e-22 110.2 164 42.1
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 2.2e-22 109.8 76 72.4
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 4.2e-21 105.5 76 68.4
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 5.5e-21 105.1 104 57.7
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.2e-20 104.0 166 42.8
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 2.1e-20 103.2 171 40.9
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 2.7e-20 102.8 161 42.2
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 3.5e-20 102.4 159 45.3
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.0e-20 101.7 99 57.6
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 1.3e-19 100.5 117 51.3
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 1.5e-18 97.1 140 45.7
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 2.5e-18 96.3 80 60.0
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.2e-17 91.3 87 59.8
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.2e-17 91.3 87 59.8
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.8e-16 90.1 80 58.8
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 1.2e-15 87.4 94 53.2
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 4.5e-15 85.5 100 51.0
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 1.7e-14 83.6 100 51.0
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 1.7e-14 83.6 100 51.0
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 1.7e-14 83.6 76 56.6
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 2.2e-14 83.2 156 42.3
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 2.9e-14 82.8 157 40.8
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 5.1e-11 72.0 176 33.5
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 6.7e-11 71.6 100 41.0
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 2.0e-07 60.1 64 48.4
Pp3c6_3990 Physcomitrium patens HOM05D001298 ORTHO05D001110 4.5e-07 58.9 74 45.9
Pp3c19_3200 Physcomitrium patens HOM05D006370 ORTHO05D008324 6.5e-06 55.1 89 42.7


User provided reference genes

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