Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.0e-167 593.2 280 100.0
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 3.1e-127 458.8 259 81.5
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 3.3e-121 438.7 265 76.2
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.3e-120 436.8 265 76.2
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 2.8e-120 435.6 263 76.0
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 1.2e-118 430.3 263 74.9
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 5.8e-118 427.9 263 74.9
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 2.9e-117 425.6 263 75.7
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 4.9e-117 424.9 277 71.1
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 4.9e-117 424.9 263 74.5
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 6.4e-117 424.5 264 74.2
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 7.1e-116 421.0 260 76.5
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 4.6e-115 418.3 263 72.6
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 4.6e-115 418.3 263 72.6
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 3.0e-114 415.6 263 74.1
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 3.9e-114 415.2 268 72.0
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 5.1e-114 414.8 263 72.6
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 6.7e-114 414.5 263 71.1
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.1e-113 413.7 259 73.0
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 2.5e-113 412.5 266 71.8
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 2.5e-113 412.5 254 74.0
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 3.3e-113 412.1 275 69.8
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 4.3e-113 411.8 263 72.6
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 7.4e-113 411.0 263 72.6
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 9.6e-113 410.6 274 69.7
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 9.6e-113 410.6 261 72.8
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 1.3e-112 410.2 262 71.8
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.6e-112 409.8 263 70.0
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.6e-112 409.8 263 70.0
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.1e-112 409.5 263 72.6
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.1e-112 409.5 245 75.5
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 3.7e-112 408.7 260 71.5
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 3.7e-112 408.7 274 68.6
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 4.0e-111 405.2 262 71.4
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 6.9e-111 404.4 284 68.3
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.0e-110 402.9 263 68.8
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 7.6e-110 401.0 266 70.7
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 2.2e-109 399.4 266 71.1
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 2.9e-109 399.1 262 69.8
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 1.9e-108 396.4 266 70.7
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 3.2e-108 395.6 266 70.3
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 3.2e-108 395.6 269 69.1
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 5.5e-108 394.8 263 69.6
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 2.1e-107 392.9 262 69.8
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 2.7e-107 392.5 261 69.0
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 2.7e-107 392.5 263 68.1
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 3.5e-107 392.1 272 68.4
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 3.5e-107 392.1 269 68.4
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 3.5e-107 392.1 262 69.5
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 6.0e-107 391.3 261 69.3
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 7.9e-107 391.0 274 66.1
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 7.9e-107 391.0 269 67.7
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.8e-106 389.8 273 67.0
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 1.8e-106 389.8 254 71.7
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 3.0e-106 389.0 254 69.7
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 5.1e-106 388.3 269 67.7
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 5.1e-106 388.3 263 68.8
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 6.7e-106 387.9 269 67.3
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 8.7e-106 387.5 263 66.9
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 1.9e-105 386.3 272 65.4
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.5e-105 386.0 248 70.2
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 2.1e-104 382.9 263 64.6
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 2.1e-104 382.9 284 64.1
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 4.8e-104 381.7 266 67.3
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 8.2e-104 380.9 265 67.2
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 8.2e-104 380.9 262 66.8
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 2.4e-103 379.4 264 66.3
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 3.4e-102 375.6 248 69.8
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.1e-97 360.5 276 61.2
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.3e-97 358.6 254 66.9
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 7.4e-97 357.8 264 65.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 4.1e-95 352.1 232 69.4
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 5.3e-95 351.7 238 68.1
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 3.4e-94 349.0 222 73.0
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 1.4e-90 337.0 252 65.1
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.5e-89 333.6 252 63.9
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.5e-89 333.6 282 58.9
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 7.4e-89 331.3 243 63.4
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 3.7e-88 328.9 242 64.9
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 2.4e-87 326.2 236 63.1
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 6.9e-87 324.7 244 63.5
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 9.1e-87 324.3 244 63.5
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 4.7e-83 312.0 194 72.7
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 7.0e-79 298.1 175 78.3
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 9.1e-79 297.7 232 58.6
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.9e-76 290.0 193 67.9
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 2.1e-75 286.6 269 50.9
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 8.8e-74 281.2 178 70.2
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 2.2e-72 276.6 237 51.5
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 4.8e-72 275.4 288 51.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 5.3e-71 271.9 260 45.0
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 1.5e-65 253.8 186 64.5
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 3.4e-65 252.7 149 75.8
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 2.3e-58 229.9 140 72.1
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 8.3e-56 221.5 146 71.9
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.8e-51 206.5 131 75.6
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.8e-51 206.5 131 75.6
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 8.0e-51 204.9 139 68.3
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 5.2e-50 202.2 161 55.9
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 9.8e-49 198.0 136 66.2
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.7e-48 196.1 138 68.1
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.7e-46 189.9 129 64.3
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 1.1e-44 184.5 111 76.6
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 8.0e-43 178.3 150 62.7
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.8e-34 150.6 97 70.1
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 8.9e-34 148.3 235 34.5
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 3.6e-27 126.3 262 37.8
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 3.6e-27 126.3 170 41.8
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 3.1e-26 123.2 111 55.9
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 4.4e-25 119.4 95 61.1
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 8.4e-24 115.2 62 80.6
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 4.7e-19 99.4 68 67.6
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 5.8e-17 92.4 60 68.3
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 8.4e-16 88.6 44 86.4
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 8.4e-16 88.6 44 86.4
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 8.7e-13 78.6 55 58.2
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 3.3e-12 76.6 158 29.1
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 6.9e-10 68.9 53 56.6
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 9.0e-10 68.6 53 56.6
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 9.0e-10 68.6 43 72.1
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.7e-08 64.3 78 47.4
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.2e-08 63.9 96 42.7
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-07 61.2 38 68.4
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-07 61.2 38 68.4
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 5.4e-07 59.3 73 45.2
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 2.1e-06 57.4 36 63.9


User provided reference genes

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