Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 2.7e-141 505.4 264 100.0
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 1.4e-121 439.9 264 90.9
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 8.3e-58 228.0 260 52.3
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 3.0e-55 219.5 254 53.5
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 3.0e-55 219.5 254 53.5
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 1.1e-54 217.6 264 51.9
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.5e-54 217.2 262 49.6
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 7.3e-54 214.9 262 51.1
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 3.6e-53 212.6 265 51.3
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 4.7e-53 212.2 262 50.4
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 4.7e-53 212.2 262 50.0
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 8.9e-52 208.0 264 47.7
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 2.0e-51 206.8 260 51.2
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 3.4e-51 206.1 260 50.8
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 4.4e-51 205.7 259 49.4
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 3.7e-50 202.6 260 50.4
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.9e-50 202.2 262 45.8
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 8.4e-50 201.4 131 87.0
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 2.4e-49 199.9 262 49.2
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 9.2e-49 198.0 262 47.3
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.6e-48 195.7 259 47.5
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.6e-48 195.7 262 45.0
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.0e-48 195.3 259 47.9
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 7.8e-48 194.9 257 48.6
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.3e-47 194.1 262 46.9
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.1e-47 192.2 259 47.1
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 1.9e-46 190.3 264 48.5
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 9.6e-46 188.0 262 45.8
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 2.1e-45 186.8 260 43.8
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 3.6e-45 186.0 260 43.8
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 4.7e-45 185.7 260 45.0
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 6.2e-45 185.3 253 46.6
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 8.1e-45 184.9 259 47.5
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.1e-44 184.5 260 43.5
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.1e-44 184.5 260 43.5
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 1.4e-44 184.1 260 43.5
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 2.4e-44 183.3 260 43.1
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 6.8e-44 181.8 257 44.0
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 8.9e-44 181.4 260 44.6
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 3.4e-43 179.5 260 43.1
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 3.4e-43 179.5 252 46.4
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 4.4e-43 179.1 255 45.1
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 4.4e-43 179.1 262 43.1
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 5.8e-43 178.7 263 43.0
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 7.6e-43 178.3 261 43.7
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 9.9e-43 177.9 263 42.2
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 1.3e-42 177.6 263 42.2
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.7e-42 177.2 256 43.4
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 4.9e-42 175.6 262 45.0
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 6.4e-42 175.3 255 43.5
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.9e-41 173.7 234 46.6
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 2.4e-41 173.3 260 43.1
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 3.2e-41 172.9 264 45.5
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 7.1e-41 171.8 255 42.0
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 7.1e-41 171.8 262 42.0
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 2.1e-40 170.2 264 45.5
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 3.5e-40 169.5 260 45.4
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 1.7e-39 167.2 263 41.1
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 3.9e-39 166.0 262 42.4
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 2.5e-38 163.3 264 41.7
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 3.3e-38 162.9 259 41.3
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 7.3e-38 161.8 263 42.2
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.3e-37 161.0 260 40.4
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.6e-37 160.6 260 43.8
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 2.8e-37 159.8 256 41.8
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 4.5e-35 152.5 236 44.1
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 1.3e-34 151.0 209 45.9
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 2.9e-34 149.8 306 36.3
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 4.2e-33 146.0 262 37.8
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 7.1e-33 145.2 260 38.5
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 1.2e-32 144.4 260 38.8
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 2.1e-32 143.7 181 50.3
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 2.7e-32 143.3 262 37.4
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 4.6e-32 142.5 259 39.4
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 3.9e-31 139.4 239 41.8
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.5e-30 137.5 258 36.4
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 7.4e-30 135.2 264 37.5
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 9.6e-30 134.8 138 55.1
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.3e-29 134.4 201 43.3
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 1.6e-29 134.0 259 35.9
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.4e-28 131.0 180 45.6
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 9.0e-28 128.3 264 36.7
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.7e-26 124.0 254 37.0
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 2.4e-25 120.2 264 36.0
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.2e-24 117.9 128 53.9
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 7.9e-24 115.2 289 32.9
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.5e-22 110.2 264 34.8
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 2.2e-18 97.1 102 54.9
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 2.5e-17 93.6 78 61.5
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 1.3e-13 81.3 92 51.1
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.1e-13 80.5 204 32.8
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 6.9e-12 75.5 104 42.3
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 5.9e-11 72.4 107 42.1
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 1.0e-10 71.6 95 46.3
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 5.5e-09 65.9 59 57.6
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 4.6e-08 62.8 55 58.2
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 4.6e-08 62.8 254 26.0
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 7.9e-08 62.0 74 47.3


User provided reference genes

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