Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 0.0e+00 1159.8 598 100.0
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 7.8e-229 797.3 579 70.1
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 4.0e-217 758.4 596 64.4
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 2.6e-216 755.7 636 64.3
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 3.4e-216 755.4 581 72.5
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.2e-215 752.7 606 66.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 2.9e-215 752.3 592 67.1
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.9e-214 749.6 583 71.7
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.6e-213 746.5 595 65.2
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 3.5e-213 745.3 579 68.6
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 9.6e-211 737.3 620 65.8
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 6.2e-210 734.6 538 72.5
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 6.2e-210 734.6 595 68.1
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.1e-209 733.8 591 67.5
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.4e-209 733.4 599 68.6
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.8e-209 733.0 595 63.7
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 4.4e-208 728.4 592 68.4
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 4.4e-208 728.4 599 67.8
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.7e-207 726.5 597 63.0
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 8.4e-207 724.2 587 66.8
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.2e-205 720.3 622 61.1
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 1.6e-205 719.9 630 63.3
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.7e-205 719.2 600 65.5
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.7e-205 719.2 607 61.6
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 6.0e-205 718.0 602 66.1
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 3.0e-204 715.7 585 62.1
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 6.6e-204 714.5 610 64.6
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 6.6e-204 714.5 505 76.2
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.5e-203 713.4 594 61.8
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.9e-203 713.0 617 59.8
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.1e-202 709.5 589 64.5
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 4.8e-202 708.4 629 58.5
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 4.8e-202 708.4 602 66.1
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.8e-202 708.4 600 62.3
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 4.8e-202 708.4 606 65.2
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 6.9e-201 704.5 622 59.6
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 5.8e-200 701.4 606 61.2
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 7.6e-200 701.0 612 64.1
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.8e-199 698.7 599 63.6
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 6.4e-199 698.0 615 60.3
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 8.4e-199 697.6 598 60.7
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.4e-198 696.8 601 65.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.4e-198 696.8 598 60.9
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 1.9e-198 696.4 608 63.2
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.9e-198 696.4 618 59.7
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.9e-198 696.4 598 61.2
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 3.2e-198 695.7 611 58.1
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.2e-198 695.7 609 58.3
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.1e-197 693.0 609 58.0
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 2.1e-197 693.0 587 64.1
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 2.7e-197 692.6 617 60.0
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 7.9e-197 691.0 611 59.7
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.0e-196 690.6 607 62.3
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 1.8e-196 689.9 613 62.5
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.3e-196 689.5 580 66.9
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 6.7e-196 688.0 612 59.3
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.1e-195 687.2 618 58.7
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.1e-195 687.2 610 59.8
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.9e-195 686.4 607 60.8
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 2.5e-195 686.0 609 58.9
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 2.5e-195 686.0 609 58.9
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.3e-195 685.6 619 59.1
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 7.4e-195 684.5 550 64.7
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.6e-194 683.3 546 66.5
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 4.8e-194 681.8 547 66.9
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 8.1e-194 681.0 596 62.1
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.8e-193 679.9 615 60.0
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 4.0e-193 678.7 614 59.4
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 4.0e-193 678.7 578 62.6
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 6.9e-193 677.9 601 60.6
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 9.0e-193 677.6 606 61.6
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.6e-192 676.0 608 63.2
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 3.4e-192 675.6 592 61.3
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 3.4e-192 675.6 620 61.3
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 5.8e-192 674.9 605 59.0
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 2.2e-191 672.9 544 66.9
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 4.9e-191 671.8 621 62.5
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 7.1e-190 667.9 600 59.8
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.0e-188 664.1 580 59.7
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.5e-187 660.2 604 57.1
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.9e-187 659.8 605 60.3
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 7.4e-187 657.9 570 61.2
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 3.4e-184 649.0 622 55.8
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 7.9e-181 637.9 606 58.1
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.9e-180 635.6 539 63.8
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.3e-179 632.1 595 56.6
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 3.4e-176 622.5 589 56.0
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 8.8e-172 607.8 469 63.5
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 5.7e-171 605.1 581 55.9
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 5.0e-167 592.0 603 55.2
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 5.0e-167 592.0 440 66.6
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 7.2e-166 588.2 628 52.1
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.1e-163 580.9 576 53.5
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 2.2e-162 576.6 552 55.1
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.4e-156 557.4 610 50.3
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 6.8e-148 528.5 517 54.7
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 8.8e-148 528.1 436 63.1
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 4.5e-144 515.8 533 51.8
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 7.7e-144 515.0 431 61.3
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.1e-125 453.8 418 61.2
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.1e-109 400.6 337 66.5
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 4.3e-102 376.3 343 63.8
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 1.2e-83 315.1 511 37.2
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 1.3e-50 205.3 437 34.1
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 5.2e-47 193.4 530 34.3
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.6e-46 191.0 248 41.1
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 9.1e-44 182.6 469 35.2
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 3.0e-39 167.5 240 33.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.9e-35 153.3 144 56.2
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 1.8e-31 141.7 90 67.8
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 2.0e-27 128.3 86 69.8
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 1.3e-26 125.6 73 76.7
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.3e-23 114.8 118 56.8
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.0e-23 114.0 98 67.3
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.2e-23 113.6 75 69.3
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 8.3e-21 106.3 58 81.0
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 7.8e-19 99.8 276 26.1
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.4e-06 57.8 30 86.7


User provided reference genes

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