Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 6.1e-61 237.3 118 100.0
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 5.8e-19 97.8 122 44.3
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 7.6e-19 97.4 115 45.2
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 1.7e-18 96.3 123 47.2
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 1.4e-17 93.2 108 50.9
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 1.4e-17 93.2 124 45.2
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 2.4e-17 92.4 114 47.4
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 7.1e-17 90.9 114 47.4
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 9.3e-17 90.5 130 40.8
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 1.6e-16 89.7 119 44.5
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 3.5e-16 88.6 125 42.4
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 4.6e-16 88.2 122 45.1
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 1.0e-15 87.0 130 43.8
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.0e-15 87.0 130 43.8
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 1.3e-15 86.7 120 42.5
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.8e-15 86.3 124 43.5
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.8e-15 86.3 124 43.5
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.3e-15 85.9 124 43.5
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 3.0e-15 85.5 126 43.7
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 3.0e-15 85.5 125 43.2
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 5.1e-15 84.7 117 45.3
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 1.1e-14 83.6 121 42.1
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 1.5e-14 83.2 107 49.5
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 1.5e-14 83.2 124 43.5
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.9e-14 82.8 120 45.0
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 3.3e-14 82.0 125 38.4
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 5.6e-14 81.3 112 49.1
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 9.6e-14 80.5 111 45.9
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 9.6e-14 80.5 113 41.6
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 2.1e-13 79.3 108 46.3
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 8.1e-13 77.4 114 45.6
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 8.1e-13 77.4 108 43.5
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.1e-12 77.0 120 42.5
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.8e-12 76.3 109 42.2
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.8e-12 76.3 118 43.2
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.8e-12 76.3 126 37.3
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.8e-12 76.3 126 37.3
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 2.4e-12 75.9 113 39.8
PGR004G1479 Punica granatum HOM05D005113 ORTHO05D006045 3.1e-12 75.5 167 32.9
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 4.0e-12 75.1 121 44.6
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 1.2e-11 73.6 112 41.1
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.2e-11 73.6 126 36.5
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 2.0e-11 72.8 116 41.4
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 2.0e-11 72.8 106 44.3
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 2.6e-11 72.4 111 43.2
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.6e-11 72.4 128 36.7
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 3.4e-11 72.0 104 46.2
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 3.4e-11 72.0 110 40.9
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 7.6e-11 70.9 92 51.1
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 9.9e-11 70.5 102 43.1
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 1.7e-10 69.7 111 44.1
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 2.2e-10 69.3 76 53.9
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 3.8e-10 68.6 94 46.8
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 3.8e-10 68.6 112 37.5
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 4.9e-10 68.2 105 43.8
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 4.9e-10 68.2 106 41.5
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 4.9e-10 68.2 104 46.2
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 6.4e-10 67.8 106 39.6
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 1.4e-09 66.6 112 42.9
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 1.9e-09 66.2 112 40.2
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 1.9e-09 66.2 128 34.4
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 1.9e-09 66.2 67 55.2
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 2.4e-09 65.9 115 34.8
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 3.2e-09 65.5 105 42.9
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 4.2e-09 65.1 67 56.7
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 4.2e-09 65.1 112 34.8
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 5.5e-09 64.7 124 36.3
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 7.1e-09 64.3 66 56.1
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 9.3e-09 63.9 129 36.4
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 9.3e-09 63.9 126 35.7
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 1.2e-08 63.5 126 36.5
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.2e-08 63.5 126 35.7
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 1.6e-08 63.2 67 50.7
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 1.6e-08 63.2 129 35.7
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 2.1e-08 62.8 70 48.6
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 2.7e-08 62.4 115 36.5
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 3.5e-08 62.0 122 35.2
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 6.0e-08 61.2 67 49.3
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 7.9e-08 60.8 91 45.1
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 7.9e-08 60.8 130 30.8
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 1.3e-07 60.1 96 39.6
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.3e-07 60.1 67 47.8
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 1.8e-07 59.7 81 45.7
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 1.8e-07 59.7 110 33.6
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.8e-07 59.7 122 34.4
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 2.3e-07 59.3 84 46.4
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 2.3e-07 59.3 102 34.3
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 3.0e-07 58.9 102 34.3
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 3.9e-07 58.5 83 43.4
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 3.9e-07 58.5 112 34.8
CDE07G0213 Ceratophyllum demersum HOM05D005113 ORTHO05D006045 5.1e-07 58.2 109 30.3
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 6.7e-07 57.8 126 32.5
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.1e-06 57.0 63 50.8
COL.COLO4_29500 Corchorus olitorius HOM05D005113 ORTHO05D006045 1.5e-06 56.6 109 32.1
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 4.3e-06 55.1 66 47.0
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 5.6e-06 54.7 128 32.8
VMungo0720G0986 Vigna mungo HOM05D005113 ORTHO05D006045 5.6e-06 54.7 119 34.5


User provided reference genes

Program Settings