Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.7e-166 588.6 293 100.0
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 7.7e-97 357.8 306 60.5
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 1.3e-96 357.1 306 60.8
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 6.6e-96 354.8 311 60.8
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.5e-95 352.8 309 59.5
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 7.2e-95 351.3 309 59.5
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 8.0e-94 347.8 302 60.9
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 4.0e-93 345.5 309 58.6
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 4.0e-93 345.5 292 59.9
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 1.7e-91 340.1 307 58.0
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 3.7e-91 339.0 303 58.4
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 4.9e-91 338.6 307 57.7
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 6.3e-91 338.2 303 57.4
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 1.3e-88 330.5 307 59.0
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.9e-88 328.9 307 56.4
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 3.9e-88 328.9 307 56.4
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 3.9e-88 328.9 303 57.8
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 8.6e-88 327.8 307 56.0
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.1e-87 327.4 307 56.0
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.5e-87 327.0 308 57.1
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 1.9e-87 326.6 297 59.3
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.5e-87 326.2 307 55.7
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 9.5e-87 324.3 310 56.5
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.1e-86 323.2 311 55.6
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 2.8e-86 322.8 300 57.7
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.8e-86 322.8 300 57.7
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 6.1e-86 321.6 307 55.7
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.1e-85 319.3 296 56.4
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 6.8e-85 318.2 307 56.7
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 6.8e-85 318.2 306 55.9
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.5e-84 317.0 315 52.7
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 9.8e-84 314.3 307 54.4
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 2.2e-83 313.2 331 51.4
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 2.2e-83 313.2 306 55.2
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 4.9e-83 312.0 307 53.4
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 6.4e-83 311.6 305 52.5
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 8.3e-83 311.2 306 54.9
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.1e-82 310.8 306 53.9
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.4e-82 310.5 306 55.9
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.9e-82 310.1 306 53.9
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 4.1e-82 308.9 305 56.1
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 5.4e-82 308.5 306 55.9
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.2e-81 307.4 306 54.2
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 3.5e-81 305.8 301 55.5
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 3.5e-81 305.8 299 53.5
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 6.0e-81 305.1 307 52.8
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 7.8e-81 304.7 300 55.0
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.3e-80 303.1 286 57.3
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 3.9e-80 302.4 303 53.8
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 5.0e-80 302.0 305 53.4
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 5.0e-80 302.0 297 55.2
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 5.0e-80 302.0 297 55.2
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 5.0e-80 302.0 309 52.8
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 6.6e-80 301.6 294 55.4
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 6.6e-80 301.6 308 54.5
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.5e-79 300.4 305 54.1
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 1.5e-79 300.4 307 51.1
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.9e-79 300.1 316 53.2
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.9e-79 300.1 305 54.4
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.6e-79 298.5 307 52.4
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.6e-78 297.0 307 52.1
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 1.6e-78 297.0 310 51.0
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 2.1e-78 296.6 364 47.3
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 3.6e-78 295.8 305 53.4
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 4.7e-78 295.4 312 50.0
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 8.0e-78 294.7 310 49.4
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 1.1e-77 294.3 307 53.7
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.4e-77 293.9 306 50.0
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.4e-77 293.9 311 49.2
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.8e-77 293.5 301 50.2
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.8e-77 293.5 311 48.9
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 3.1e-77 292.7 310 52.3
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 5.2e-77 292.0 308 51.3
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 8.9e-77 291.2 308 51.3
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 2.6e-76 289.7 308 51.6
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 2.6e-76 289.7 311 51.8
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 4.4e-76 288.9 304 50.3
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 4.4e-76 288.9 305 52.1
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 5.8e-76 288.5 306 49.0
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 5.8e-76 288.5 309 49.5
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 7.5e-76 288.1 305 51.8
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 2.2e-75 286.6 306 50.0
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 7.0e-74 281.6 312 49.0
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.6e-73 280.4 278 54.0
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 4.6e-73 278.9 304 51.3
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 6.6e-72 275.0 305 48.9
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 3.6e-70 269.2 306 45.8
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 4.0e-69 265.8 309 46.3
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 5.2e-69 265.4 305 49.2
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 6.8e-69 265.0 314 47.1
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.2e-68 264.2 314 47.1
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 4.4e-68 262.3 311 46.6
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.7e-64 250.4 306 46.7
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 6.8e-61 238.4 235 55.3
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 7.6e-60 235.0 292 45.5
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 4.2e-58 229.2 211 57.8
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 1.2e-57 227.6 262 47.7
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 3.9e-56 222.6 240 50.8
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.6e-54 216.1 305 44.9
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.4e-50 204.1 275 44.0
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.4e-50 202.2 203 53.2
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 8.1e-46 188.3 202 52.0
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 9.3e-42 174.9 242 41.3
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.4e-37 161.0 197 48.2
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.0e-36 157.1 163 57.7
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 3.7e-30 136.3 119 54.6
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 4.0e-29 132.9 218 42.2
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.4e-28 129.8 105 60.0
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 3.8e-27 126.3 301 30.6
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.1e-23 114.8 124 46.8
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 1.7e-19 100.9 112 49.1
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.1e-18 98.2 279 30.1
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 7.2e-18 95.5 122 49.2
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 1.6e-17 94.4 145 40.7
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.6e-17 94.4 146 40.4
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-16 91.3 146 39.0
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 6.7e-16 89.0 262 31.3
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-15 88.2 68 57.4
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 2.5e-15 87.0 67 58.2
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-14 84.7 124 41.9
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 6.3e-14 82.4 149 38.3
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 8.2e-14 82.0 123 41.5
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 9.1e-13 78.6 107 43.9
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 5.9e-12 75.9 73 47.9
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 8.8e-08 62.0 112 35.7


User provided reference genes

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