Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 2.7e-31 137.9 64 100.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.1e-27 125.9 64 89.1
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.8e-27 125.2 64 87.5
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 7.0e-27 123.2 64 89.1
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 2.0e-26 121.7 63 84.1
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 2.7e-26 121.3 63 87.3
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 3.5e-26 120.9 63 87.3
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 5.9e-26 120.2 63 82.5
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 7.7e-26 119.8 64 84.4
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 7.7e-26 119.8 63 84.1
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 7.7e-26 119.8 63 84.1
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.0e-25 119.4 64 81.2
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.0e-25 119.4 63 85.7
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 1.7e-25 118.6 64 84.4
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 1.7e-25 118.6 63 84.1
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.7e-25 118.6 64 81.2
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 2.3e-25 118.2 64 81.2
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.1e-24 115.9 64 82.8
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 1.9e-24 115.2 63 81.0
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 3.3e-24 114.4 64 78.1
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 3.3e-24 114.4 64 78.1
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 3.3e-24 114.4 64 79.7
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 4.3e-24 114.0 64 81.2
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 1.2e-23 112.5 64 78.1
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 1.2e-23 112.5 64 78.1
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 1.2e-23 112.5 64 78.1
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 1.2e-23 112.5 64 78.1
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 1.6e-23 112.1 64 78.1
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 2.1e-23 111.7 61 80.3
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.8e-23 111.3 63 77.8
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 3.6e-23 110.9 64 78.1
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 4.7e-23 110.5 64 78.1
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 4.7e-23 110.5 64 78.1
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 4.7e-23 110.5 65 81.5
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 6.1e-23 110.2 61 78.7
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 6.1e-23 110.2 72 72.2
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 78.1
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.4e-22 109.0 64 76.6
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.4e-22 109.0 64 76.6
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.8e-22 108.6 64 76.6
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 4.0e-22 107.5 63 74.6
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 6.8e-22 106.7 59 81.4
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 8.9e-22 106.3 60 80.0
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.5e-21 105.5 64 76.6
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 1.5e-21 105.5 58 77.6
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 7.5e-21 103.2 60 75.0
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 1.3e-20 102.4 58 79.3
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.7e-20 102.1 60 75.0
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 2.9e-20 101.3 60 78.3
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 1.8e-19 98.6 70 67.1
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 3.2e-19 97.8 58 75.9
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 4.1e-19 97.4 58 75.9
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 4.1e-19 97.4 60 75.0
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.1e-16 89.4 59 71.2
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 2.5e-16 88.2 55 65.5
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 9.5e-16 86.3 64 65.6
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 2.1e-15 85.1 58 62.1
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.5e-13 79.0 53 64.2
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 3.4e-13 77.8 58 58.6
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 4.4e-13 77.4 45 75.6
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 7.5e-13 76.6 59 49.2
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 9.8e-13 76.3 64 60.9
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.7e-12 75.5 56 64.3
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.2e-12 75.1 64 59.4
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.2e-12 75.1 64 59.4
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 4.9e-12 73.9 64 59.4
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 6.4e-12 73.6 64 57.8
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.4e-11 71.6 64 56.2
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 9.2e-11 69.7 59 55.9
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 2.0e-10 68.6 36 80.6
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 3.0e-09 64.7 63 49.2
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 1.5e-08 62.4 29 93.1
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 4.3e-08 60.8 43 69.8
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 1.2e-07 59.3 29 89.7
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 1.2e-07 59.3 29 89.7
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.6e-07 58.9 29 86.2
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.6e-07 58.9 57 47.4
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.4e-06 55.8 32 71.9


User provided reference genes

Program Settings